Protein

View in Explore
Genbank accession
QIG76741.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVILPSTYTDGTAVCTNGSPNVVGTGTMWLNTILPGDFFWTPSGESVRILTVVDDTHITLAYNWPGATQATGPYEIRFQSDQGRVQETTRQLLERMQSGNLYAFAGLNGLTDTVPYFTGPGAMGLLTREELTSGVNYDVVVDTLPDRDAYDSQATGFTVLVADIGDGRAAVFFKNSVAVGDWSAPAYVTGPRGLRWRGDWSNATAYDEDDAVSYNGASYIALVDNTNVTPVAGATWGSLAARGATGLTGVNPRGTYSGATAYAISDAVLYNGSTYVAIAATTGNAPPTPPTTSNTWWQLLALKGTDGTGTGDVVGPAGVVDGNAAMFNGVTGKLIKAATPSEFRTWLAQTAATVSFNNSVANLPGAPTTTQAAIESLAANSGGKNDSIFALEIADLKGQRTGMNGGVADAFDDTSGINLSSGGIDTNTLLMLHCDGLNNSTSFPDSSSNNRTVTAVADAKVSTSQSVFGGASVVLDGTGDYLSVPDSDDFAFGTGNFTIDMRVRVTNFGGGGMFVSHENPGTPLNCYRFYVASTGAVYFQLYSANSLVFNINSAAGVVALNTWYHIAVVRNGNTFTIYANGVSVATGTSTASIPNYTGPLKFGMGPTSNNQFFNGFFDEIRVSNVARWTANFTPPATAYFTDTSSSQNYIYDATNDWFIPTGSQITAATASDTTAAISGSVTYTVVDRTLSIPNNATIAAVGIYSTSSFTTAFKIVRRTAAGTYDVLASYAFTHPGGGWYDYTLPTPYVTPSSGTLMPAALVPAAFTANIYTTTRGFKSGDQAVATGVTGWTEDSGLTPIYRLSYLVDNMTLISTIYPAVSVPTTARIALQLADSVTLVPNTDFSAEVSRDGGTTWTAATLALLMNFNGLKVYEGTVSLTGQPSGSNMQWRVKSLTNKIVIASGVVLQQS
Physico‐chemical
properties
protein length:911 AA
molecular weight: 95441,69340 Da
isoelectric point:4,55135
aromaticity:0,10318
hydropathy:0,01098

Domains

Domains [InterPro]
DC_1819
STR
140–253
DC_1819 IPR003610 DC_2085 DC_2089
IPR003610
CBM
198–240
IPR003610 DC_0876 G3DSA:2.60.120.200
G3DSA:2.10.10.20
ATT
200–240
G3DSA:2.10.10.20 G3DSA:2.10.10.20 IPR013320
PF13385
LEC
477–628
PF13385
QIG76741.1
1 911
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 140-199 | ATT 200-240 | STR 241-255 | ATT 256-300 | STR 301-635 | RBD 636-911
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y52
[NCBI] 		2509783 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG76741.1 [NCBI]
Genbank nucleotide accession
MN988557.1 [NCBI]
CDS location
range 20581 -> 23316
strand -
CDS
ATGGCTGTCATTCTCCCATCGACGTACACGGACGGCACCGCCGTTTGCACGAACGGTTCGCCGAATGTTGTCGGCACGGGTACGATGTGGTTGAACACGATCCTGCCGGGCGATTTCTTCTGGACGCCTTCGGGCGAATCCGTGCGTATTCTGACGGTCGTCGACGATACACACATCACGCTCGCTTACAATTGGCCCGGCGCGACACAGGCAACCGGACCGTATGAAATCCGGTTCCAGTCCGATCAGGGGCGCGTGCAAGAGACGACCCGTCAGCTTCTTGAACGGATGCAGTCGGGCAACCTGTACGCGTTCGCCGGCCTGAACGGGCTGACGGATACCGTTCCGTACTTCACCGGGCCGGGCGCAATGGGTCTCCTGACCCGCGAAGAACTGACCAGCGGCGTCAATTACGACGTCGTCGTTGACACGCTGCCGGATCGTGACGCGTATGACAGCCAAGCAACCGGCTTCACCGTCCTTGTCGCGGATATCGGCGACGGCCGGGCGGCTGTGTTCTTCAAAAACTCCGTGGCGGTTGGCGACTGGTCGGCACCGGCCTACGTCACAGGCCCGCGTGGTCTCCGCTGGCGTGGCGACTGGTCGAACGCGACGGCATATGACGAAGATGACGCGGTTTCCTACAACGGCGCGTCTTATATCGCGCTGGTCGACAATACGAACGTGACGCCCGTTGCCGGCGCAACGTGGGGTTCTCTCGCAGCGCGTGGCGCGACCGGCCTGACCGGTGTCAATCCACGCGGCACTTATTCGGGCGCGACCGCTTACGCAATTTCGGATGCGGTTCTTTACAACGGCTCGACATACGTCGCAATCGCCGCAACGACCGGCAACGCACCGCCGACGCCGCCGACAACGTCTAATACATGGTGGCAACTGCTCGCACTGAAGGGCACGGACGGCACCGGAACGGGTGACGTGGTCGGTCCGGCTGGCGTCGTCGACGGAAACGCCGCGATGTTCAACGGTGTGACCGGTAAGCTGATCAAAGCCGCGACGCCTTCGGAATTCCGGACGTGGCTTGCGCAAACCGCCGCGACCGTGTCTTTCAACAACTCGGTTGCGAACCTTCCCGGCGCGCCGACGACCACACAAGCCGCGATCGAGTCCCTTGCTGCGAACAGCGGCGGCAAGAATGATTCGATCTTCGCGCTTGAAATCGCCGATCTGAAGGGGCAACGTACGGGCATGAACGGCGGCGTCGCCGACGCCTTTGACGACACATCCGGAATCAACCTTAGTTCAGGCGGTATCGACACAAATACGTTACTCATGTTGCACTGCGACGGTTTGAACAACTCGACATCGTTTCCCGATTCGTCCAGTAATAACCGTACGGTGACCGCTGTCGCTGACGCAAAGGTCAGTACCTCACAATCCGTTTTCGGCGGCGCATCGGTCGTACTGGACGGCACCGGTGATTATCTTTCAGTTCCGGACTCGGACGACTTCGCGTTCGGGACCGGGAACTTCACAATTGACATGCGCGTTAGGGTGACGAACTTCGGCGGCGGCGGCATGTTCGTTTCCCATGAAAATCCGGGAACACCGCTGAACTGCTATCGCTTTTACGTAGCATCCACCGGAGCGGTATATTTCCAGCTTTATTCGGCGAACTCGCTTGTCTTCAACATCAACAGCGCCGCCGGTGTCGTCGCGCTCAATACGTGGTATCACATCGCGGTTGTCCGGAACGGCAACACCTTCACAATTTACGCAAACGGCGTGTCCGTTGCGACCGGCACAAGTACCGCGTCAATTCCGAACTATACCGGCCCGTTGAAATTCGGTATGGGTCCGACCAGTAACAACCAGTTCTTTAACGGGTTCTTCGATGAAATCCGAGTTTCGAACGTTGCCCGCTGGACCGCGAATTTCACGCCGCCGGCAACCGCATATTTCACCGATACAAGTTCGTCGCAGAACTATATTTACGACGCAACGAACGATTGGTTCATTCCGACCGGATCACAAATTACCGCTGCGACAGCTTCAGACACAACGGCGGCAATATCGGGGTCAGTGACTTACACTGTAGTTGACCGGACGCTTTCGATCCCGAACAACGCCACGATTGCGGCGGTCGGCATTTATTCGACATCTTCTTTCACAACGGCGTTCAAAATCGTGCGCCGCACCGCTGCCGGCACATACGACGTATTGGCATCGTATGCATTCACCCATCCCGGCGGCGGATGGTACGATTATACGTTACCGACACCATACGTGACCCCGTCTTCGGGTACGTTGATGCCGGCAGCGTTGGTCCCGGCCGCGTTTACTGCGAACATCTACACAACCACCCGTGGATTCAAGTCCGGCGACCAAGCTGTCGCAACCGGCGTCACTGGTTGGACGGAAGACAGCGGACTTACTCCAATTTACCGCCTGTCATACCTTGTCGACAACATGACTCTGATTTCGACGATCTATCCCGCCGTGTCAGTTCCGACAACGGCGCGTATCGCCCTGCAACTCGCCGACTCGGTGACGTTGGTTCCGAATACCGACTTCAGCGCCGAAGTGTCGCGCGACGGCGGTACGACGTGGACGGCGGCGACACTTGCCCTGTTGATGAACTTCAACGGCCTGAAGGTTTACGAAGGAACGGTCAGCCTAACCGGTCAGCCTTCGGGTTCAAATATGCAATGGCGCGTGAAGTCGCTGACGAACAAAATCGTCATCGCTTCGGGCGTCGTCCTGCAACAATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3a45095918cface3f78df7d54fbc434d098f02327486353fb3d1bd250c6e698e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8340
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank