Protein

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Genbank accession
AHK11870.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MDINVGGTWKATNPHVNVGGTWKPVSIGWVNVGGTWRKYFTSEFTYTVPANIANFNLYNTIGIPEADVINVIVPAGVTIYATSTSTPAFNIGNAYNGKTINIINKGGIYGMGGGASAGVGVAGGTALYLRTQNKVTIFNDGVIGGGGGGAGKGGTGGPGYYTTQSTIREPSSGSFDPNGSIQAGYFGGGADLLINGNRVARIEEQFSRVLANGMVFNYGGYIYYTSQYTGAGIGELKCNYIYRTRVVTNTINTNGGAGGNGGRGQGYNSVNQGGAGGAAGGANAGRGGTGGTGGTWGQPGATGNTGAGGNRGAGYGGSAGGRAGYAIDGNSLTIVKTVGSILGGRVN
Physico‐chemical
properties
protein length:347 AA
molecular weight: 34632,73080 Da
isoelectric point:9,59246
aromaticity:0,09798
hydropathy:-0,17089

Domains

Domains [InterPro]
DC_1762
ATT
1–171
DC_1762 DC_0422
IPR007932
RBD
43–197
IPR007932
AHK11870.1
1 347
Architecture
ATT
RBD
RBD
ATT 1-171 | RBD 172-197 | RBD 200-346 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage CHOED
[NCBI] 		1458716 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio anguillarum
[NCBI] 		55601 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHK11870.1 [NCBI]
Genbank nucleotide accession
KJ192399 [NCBI]
CDS location
range 9032 -> 10075
strand +
CDS
ATGGATATTAATGTTGGTGGGACTTGGAAAGCAACCAACCCACACGTTAATGTTGGTGGTACATGGAAGCCCGTCAGTATTGGATGGGTAAACGTTGGGGGCACTTGGAGGAAGTATTTTACCTCTGAGTTCACCTATACGGTCCCTGCGAATATCGCTAACTTTAACTTATATAATACAATAGGGATTCCAGAGGCTGATGTTATTAACGTCATAGTCCCTGCTGGTGTCACTATCTATGCTACTTCAACCAGTACACCTGCCTTTAATATTGGTAATGCTTATAATGGTAAGACAATAAACATTATCAACAAAGGTGGTATTTATGGTATGGGAGGAGGAGCCTCGGCTGGCGTAGGGGTCGCAGGTGGTACAGCTTTATACCTACGAACCCAGAACAAAGTAACCATCTTCAATGATGGTGTGATTGGTGGTGGCGGCGGTGGCGCCGGTAAAGGTGGTACAGGTGGTCCGGGCTATTACACAACGCAATCGACTATAAGAGAACCATCAAGTGGTTCCTTTGACCCTAATGGTAGCATACAAGCTGGGTACTTTGGCGGCGGCGCAGACTTACTTATCAATGGTAATAGGGTTGCACGTATCGAGGAACAATTTTCACGTGTACTTGCTAATGGTATGGTGTTTAATTATGGTGGATACATTTACTACACCTCTCAATATACTGGTGCAGGTATAGGTGAATTAAAATGTAACTACATCTACCGAACCCGTGTTGTTACTAACACTATAAACACCAATGGTGGCGCAGGTGGTAACGGAGGTCGAGGCCAAGGTTACAACTCAGTTAACCAAGGAGGTGCCGGAGGTGCCGCAGGTGGTGCTAACGCTGGACGTGGGGGTACTGGTGGTACTGGTGGTACTTGGGGTCAACCGGGAGCTACTGGTAACACAGGCGCAGGTGGTAATCGAGGTGCTGGTTATGGTGGTTCCGCAGGTGGCCGTGCAGGTTACGCTATTGATGGTAACTCACTAACCATCGTGAAAACCGTAGGTTCCATCTTGGGTGGCCGTGTCAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7d9bafcd574f61f7119f19d5a559f0eb4c9ab2189463538508ee6c6fd9f481f8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7145
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Vibrio anguillarum bacteriophage CHOED of the family Podoviridae, successfully used for phage therapy in aquaculture Romero,J., Gajardo,F., Higuera,G., Castillo,D., Middleboe,M., Garcia,K., Ramirez,C. and Espejo,R. 2014-08-28 — GenBank