Protein

View in Explore
Genbank accession
CAL9991981.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MTTKVPNTMIEGSTINVKDFGAKGDGVTDDTAAIQDAINAGRRIYISQQAYI
Physico‐chemical
properties
protein length:52 AA
molecular weight: 5561,17550 Da
isoelectric point:4,85487
aromaticity:0,05769
hydropathy:-0,25385

Domains

Domains [InterPro]
IPR012334
STR
3–52
IPR012334
DC_0685
STR
5–52
DC_0685
IPR011050
STR
12–45
IPR011050
IPR024535
ENZ
15–39
IPR024535
CAL9991981.1
1 52
Architecture
STR
STR 3-52
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAL9991981.1
1 52
Domain Start End Length (AA) Confidence
N-terminal 1 30 30 0,8923
Central domain 31 41 12 0,9529
C-terminal 42 52 10 0,1018
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-30
Central
31-41
C-terminal
42-52

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage K474
[NCBI] 		3105742 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL9991981.1 [NCBI]
Genbank nucleotide accession
OZ195913.1 [NCBI]
CDS location
range 88716 -> 88874
strand -
CDS
ATGACAACAAAAGTTCCAAATACAATGATTGAAGGTTCGACCATAAACGTAAAAGATTTTGGCGCTAAAGGTGATGGTGTAACTGATGATACTGCTGCTATTCAAGATGCCATTAACGCAGGCAGGCGTATATATATATCCCAACAGGCGTATATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
29d70ae57f1e217afd956c48cfef81161af7184aaac60f4f5af854053d922dcf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6578
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50