Protein

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Genbank accession
YP_009276966.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MAIPDYIDFQGTIVLRRGTKLQWETKNPILREGEMGLELPNHVFKMGDGTTRWKDLPYVGIKGDQGVQGPKGDTGPTGDVTPAATAAANAAAASATAANTARNGAEDARDTALVYKSAAEAAAANASSSANTASTFAQQTSQDAQKSETQAGNAQASATAASASKDVVIAALNQIQDGKRDVWNAGLDYVAGYTAELNLSQVPLRPSTVQLFFNGLFQFTDGYTINGKKITFTSPIPTEVTRIEAVYSLPGTAYSQEVIDAGTNAVSSANAAAASASAAATSAAAAAVAASGTRQVFNGVTISNSQIDFDLTNASPVFAKQTILVNLVRGEMALSDSCVIEILETDGTNTTSLYLTTTVNGLYKDIVPFTIDKQATSNHIILRIHGTANNATFTVNAF
Physico‐chemical
properties
protein length:398 AA
molecular weight: 41392,42440 Da
isoelectric point:4,91586
aromaticity:0,06784
hydropathy:-0,10050

Domains

Domains [InterPro]
SSF69349
STR
13–137
SSF69349
IPR041352
ATT
15–51
IPR041352
YP_009276966.1
1 398
Architecture
ATT
STR
ATT 13-51 | STR 52-137 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RSP15
[NCBI] 		1785960 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009276966.1 [NCBI]
Genbank nucleotide accession
NC_030948 [NCBI]
CDS location
range 3935 -> 5131
strand -
CDS
ATGGCGATTCCTGATTATATCGACTTTCAAGGGACGATTGTCCTAAGACGCGGTACAAAACTACAATGGGAGACAAAGAATCCGATCCTCCGTGAGGGGGAAATGGGTCTTGAACTCCCGAACCACGTCTTTAAAATGGGCGATGGTACAACGAGATGGAAAGACCTTCCCTATGTTGGAATCAAAGGCGATCAGGGGGTTCAAGGTCCAAAGGGTGATACCGGCCCAACTGGTGATGTAACGCCCGCTGCAACTGCGGCTGCAAATGCTGCTGCGGCTTCTGCTACAGCCGCTAACACGGCTAGAAACGGTGCTGAGGATGCTAGAGATACGGCCTTGGTTTATAAGAGTGCTGCTGAGGCTGCTGCTGCGAATGCTTCATCAAGTGCCAACACCGCATCAACGTTTGCTCAACAGACATCACAGGATGCTCAAAAATCAGAAACGCAGGCTGGTAATGCACAGGCTTCTGCAACTGCGGCTTCTGCATCTAAGGATGTCGTGATTGCTGCCCTGAATCAGATTCAGGATGGTAAGCGTGATGTGTGGAATGCTGGCTTGGATTATGTTGCTGGTTACACCGCTGAGCTTAATCTGTCACAAGTTCCTTTGCGTCCTAGCACGGTTCAACTGTTCTTCAATGGGTTGTTCCAATTCACAGATGGTTACACCATCAATGGGAAGAAGATTACCTTCACATCTCCAATTCCAACCGAAGTTACAAGAATTGAAGCTGTTTATTCATTGCCGGGAACTGCATACTCACAGGAAGTGATTGATGCGGGGACCAATGCGGTAAGCAGTGCCAATGCCGCTGCTGCCTCTGCTTCTGCGGCTGCTACTTCTGCTGCGGCTGCGGCTGTTGCAGCATCCGGGACACGGCAAGTCTTTAACGGCGTGACGATTTCTAACAGTCAGATTGATTTCGATTTGACCAATGCTTCACCTGTATTTGCTAAACAGACAATTTTGGTAAATTTGGTCCGTGGTGAAATGGCACTATCTGATAGTTGTGTCATTGAAATTTTGGAAACTGACGGGACAAATACCACAAGTCTATATCTGACAACAACTGTAAATGGTCTTTATAAAGATATTGTCCCATTCACGATTGATAAGCAAGCGACAAGCAATCACATCATTCTAAGAATTCATGGGACAGCAAATAACGCCACATTCACAGTTAATGCTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c58480837ea349aaa4529d6302b8ca3d0922db4008bb471bb902850915c30ae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7845
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of a phage RSP15 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Fujie,M., Chatchawankanphanich,O., Ogata,H. and Yamada,T. 2010-03 — GenBank