Protein

View in Explore
Genbank accession
XYA29643.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNIKARKGGSSSPRTPVEMPDNLISKDKVKLLLAVSDGEVVNDFSLKQLHFGGVPVQNEDGTFNYEGVIAEFRPGTQTQDYIQGFSESSAEFQVAREVTHNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTGKIDGKNTTGGYDRSIRVNLPQDFTSQVLIRVSRITPDADGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIVQVPSNYDPVNRTYAGTWDGTFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVSQYCDELVPDNRGGMEPRYLMDMVVQSQVEAFQLVRDVCSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNADAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPLRRTIASVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYNPNKYDAIDNGVITDDRPTSVVDPDSMGAPENVSISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARARCISGGNVASPWSALATATLTGKVGAPKGPINLFASDDEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPASEYWHSILPAGYVNFYKARSVDRIGNVSAWTDYARGMSSTDVNAITDAILDEILDSDAMKELQESAQDSAAKLNDYANSIIQNALANDADVRIMKKENGKRKAEIKHAEVLIANETEARVQQVNQISAEFNENLNAGLTQVNEALANETEARVTSEEALLARIGQNSAALDQKLDSWANVNGVGSMYTMKLGLKYNGQEYNSGMALQLTAQGGSVVSQVLFIADRFAIIRNAESGDYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSNNYIAGQQGWMINKNGGSEFQNTTVRGTIYATDGVFKGTVQAEAFIGDIAVAKRYDSMTLRRNQTVQRNGFYQNRGYGMTIVLACTLVGEAYGTGSSNLGYNVDVTFNIGGQQVVRRIYIDAGNIAQGTTSVELRFAANIDADYNNVSFFVKATGRDAVTDYTVTIDNITATAFRTDSNSFS
Physico‐chemical
properties
protein length:1233 AA
molecular weight: 136098,49850 Da
isoelectric point:4,71573
aromaticity:0,09651
hydropathy:-0,28175

Domains

Domains [InterPro]
DC_0014
STR
1–1232
DC_0014
IPR053171
Unmapped
3–877
IPR053171 Coil IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR036116 Coil
XYA29643.1
1 1233
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1232 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYA29643.1
1 1233
Domain Start End Length (AA) Confidence
N-terminal 1 501 501 0,8631
Central domain 502 1052 552 0,0624
C-terminal 1053 1233 180 0,7357
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-501
Central
502-1052
C-terminal
1053-1233

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnS-Uqbar
[NCBI] 		3447926 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYA29643.1 [NCBI]
Genbank nucleotide accession
PV891805.1 [NCBI]
CDS location
range 43469 -> 47170
strand -
CDS
ATGACTAATATCAAGGCCCGCAAGGGTGGCTCAAGTTCGCCGCGTACTCCCGTAGAAATGCCAGATAACCTGATCTCGAAAGATAAGGTTAAATTGTTGCTTGCTGTTTCAGATGGCGAGGTGGTTAACGACTTCAGCTTGAAGCAGTTGCATTTTGGCGGCGTCCCGGTTCAGAACGAGGATGGAACATTCAACTATGAGGGCGTGATTGCAGAGTTCCGCCCCGGCACGCAAACGCAGGACTACATCCAGGGCTTCAGCGAGTCAAGTGCTGAATTCCAGGTTGCTCGTGAAGTCACTCACAACACGCCGTACACGCTTACCGTATCGAACAAAAATCTGTCTGCTATTCGCTTCCGCCTGTTATGGCCGCGCGTGCTGACTCAAAAAGATAATGGCGATATGGTCGGATCGGTTGTTGAATACAAGATCGAGATGGCGGTAGACGGCGCAAGTTATCAGACTTACCTGACTGGCAAGATTGACGGCAAGAACACGACTGGCGGTTACGATCGGAGCATCCGCGTCAACTTGCCGCAAGACTTCACGTCGCAGGTTCTTATCCGCGTAAGCCGAATTACGCCGGACGCTGACGGGGTGAAGGTGGTCGATGCCTTCCAGGTTCAGTCCTACGCTGAGGTGATCGATGCAAAATTCCGCTATCCGCTGACGGCAATGCTTTACGTCGAGTTTGATAGCGATCTGTTCCAGAACCAGATCCCGACAATCTCGCTCAAGAAGAAGTGGAAGATTGTTCAGGTTCCGAGTAACTACGACCCTGTTAACAGGACGTATGCCGGAACGTGGGACGGAACTTTCAAATGGGCGTGGAGCAACAACCCAGCCTGGGTTCTTTACGACCTGATCATGAATCAGCGTTATGGGTTAGACCAGCGCGAGTTAGGGATCCCGGTCGACAAGTGGTCGCTCTATGAGGTGTCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGCGGGATGGAACCGCGTTACCTGATGGATATGGTCGTGCAGTCGCAGGTCGAAGCCTTCCAGTTGGTCAGGGATGTTTGTTCCGCATTCCGTGGAATGACGTTCTACAACGGGGAAAGCCTTTCGATTATCGTCGATAAGCCACGCGATCCGGTTTACCTGTTCACTGCTGATAACGTCGTTGATGGCGTATTCGTGCGAACTTTTCCGAGCGAAAAAACGATGTACACGTCGTGCAACGTGATGTTCGACGACGAAGAGAACCAGTACGAACAGGACGTTGAACCAGTATTCAACGCTGACGCTGCAATGCGGTTCGGTCACAACCCGACAAGCATCACGGCGATCGGCTGCACCAGACGGACAGAAGCAAACCGCCGCGGGCGATGGATTCTGCAAACGAACCTAAGCGCAACCACCGTTTCGTTTTCTACTGGACTGGAAGGCATGATCCCGTCATGCGGCGATGTGATTTACGTTGCAGATCCGCATTGGCAATCGGCCTTTAACCTGGTGCTTTCGGGGCGAATCATGGAAGTAACGGGAACGCAGGTTTTCCTGGCTTTCCGCTGCGACGCGAAGGCTGGCGACACTCTGATCCTGAACACTGACGACGGTAAGCCATTGCGCCGAACCATTGCCAGCGTATCAGCAGACGGAAAAACCCTGACGCTAAACGTGGGATATAACTTCGACGTTGCGCCGGACAGCGTATTCCTGATCGAAAGTGACCAATTGGCGGCTGAACAGTACGTTGTTACCAGGATTGAGAAGGGGAGCGATGACGACGAATTTACTTTCGCCATCACAGCCACCCAATACAACCCGAACAAGTACGACGCGATCGACAACGGCGTAATCACTGACGACCGCCCAACGTCGGTTGTTGACCCTGATTCAATGGGGGCGCCGGAAAACGTGTCGATTAGTTCATTCTCACGCATTGTGCAGGGTATGAGCGTCGAGACGATGGTTATTGGATGGTCTGCTGTGCAGTATGCAAAACTGTACGAGGTGCAATGGCGTAAGGATGGCGGGAACTGGAACAACGTTCCGCGAACGGCGACAACGCAGGTTGATATCGAGGGGATTTACGCTGGCGAGTATCAGGCCCGCGCAAGGTGCATTAGCGGCGGGAATGTAGCATCTCCGTGGTCTGCTTTGGCAACCGCCACACTGACCGGGAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCGGACGATGAGATCTTTGGCATTCGCGTTAAGTGGGCCATGCCTGAAGGTGCGGAAGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACCCTGATTCCTTACCCGGCTTCTGAATACTGGCATTCAATTCTGCCCGCTGGCTATGTGAACTTCTACAAAGCCAGAAGCGTAGACCGTATCGGCAACGTTTCAGCGTGGACTGATTACGCTCGCGGCATGTCTTCTACTGACGTTAACGCCATCACGGATGCGATCCTGGATGAAATCCTTGATAGCGACGCAATGAAAGAACTTCAGGAGAGCGCGCAGGATAGCGCGGCAAAACTCAATGACTACGCTAACAGCATCATCCAAAATGCGTTGGCTAATGATGCAGACGTTAGAATAATGAAAAAGGAGAATGGCAAGAGGAAAGCTGAAATTAAACACGCAGAAGTTCTCATAGCAAATGAGACGGAAGCCAGGGTTCAGCAGGTTAACCAGATATCGGCAGAGTTCAACGAAAACCTCAATGCTGGATTAACTCAAGTTAACGAGGCACTAGCCAATGAAACTGAGGCTCGCGTTACGTCTGAGGAGGCGCTATTAGCAAGGATTGGCCAGAACTCCGCAGCGCTAGATCAGAAACTCGATTCGTGGGCGAACGTTAATGGCGTCGGCTCCATGTACACGATGAAGCTGGGCTTGAAGTACAACGGACAGGAATATAATTCCGGGATGGCCCTACAGCTTACCGCTCAAGGGGGAAGCGTTGTTTCACAAGTGCTTTTCATTGCTGATAGATTTGCCATAATCCGCAATGCTGAATCCGGTGATTACACGCTACCCTTTGTCGTGCAGAATGACCAGGTTTTCATGAATAACGCGCTTATTCAGGATGGTTCGATTACCAACGCGAAGATCGGTAACGTTATTCAGTCAAACAACTACATCGCCGGACAGCAAGGGTGGATGATTAACAAGAATGGCGGTTCTGAATTCCAGAACACTACTGTTCGAGGGACTATCTACGCGACAGATGGCGTATTTAAAGGGACTGTACAGGCGGAAGCGTTTATAGGAGATATCGCCGTAGCAAAGCGTTATGACAGCATGACGCTACGCCGAAACCAGACCGTGCAGCGAAACGGATTTTACCAGAACCGTGGATATGGTATGACTATAGTTCTAGCGTGTACGCTAGTTGGTGAGGCATACGGAACAGGATCGTCAAACCTAGGCTATAACGTTGACGTTACATTTAACATAGGAGGACAGCAAGTTGTTCGCCGCATATACATTGATGCTGGTAATATTGCTCAAGGGACTACTTCCGTTGAGCTTCGCTTTGCTGCCAATATTGACGCTGATTATAACAATGTCAGCTTCTTTGTGAAGGCTACAGGTAGGGATGCTGTTACCGATTACACCGTGACAATTGATAACATCACGGCAACCGCTTTCCGCACGGACAGTAACTCTTTCAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
75fe6d6853285f6941a67917833a1032e631042a25adf35b1e84d29b96b42f47
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8127
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genomic Analysis of Seven Phages Active Against Carbapenem-Resistant Klebsiella pneumoniae Cuello,L., Parmar,K., Supandy,A., Van Tyne,D. and Patel,R. — — GenBank