Protein

View in Explore
Genbank accession
QBX31457.1 [GenBank]
Protein name
endopeptidase
RBP type
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MTRLVSQQILSEYVKSLEIEADKVVIPGQHTPVFSLDRYGSLSIDTPLLKVRGESLATKVDLKAISLTPGPKGDAGADGVGIQLREQYYLVSAQKTSVTATNSGWSKTIPFLTSTLKYLWNYEKTTFTNGSTTVTTPVVTGVYGDKGMDGKAGKDGKTLYTWRMYADSDKGEGLSAIPTGKRYLGLAVNKESATPSTNPGDYIWSSFFEGTELGGRNYIDDYAMKAMTFSSVTSEWKKEVIEDTSSVSGVTIKLTCTKAGTGGFHRNFHDLRSRIGATMTFSIDIKCSKSVTLNMGCELGGTKAYEVTTDWQRCVSSWKVSSYQYYSYIFYLKSGSWSVGDVVYLRNVQLEDGNVASAPGPSLNDLIAQIDAKADNGFMKQQLDLLTEKTESLRVDLEARALAKEVADWLKSYKEFEKNNEAVLAQFNQDFIDNTARIAAIEADLKANSLLLNFVNTYLRAGDNGVIIGKKDNSEYIELTPQGMIKSAGNAVMTVTAGVIKIHHGVFVETLQVGYYRLEAARHNAKHLVCRFIDAK
Physico‐chemical
properties
protein length:536 AA
molecular weight: 58910,00730 Da
isoelectric point:7,04698
aromaticity:0,09515
hydropathy:-0,26157

Domains

Domains [InterPro]
DC_1545
STR
14–536
DC_1545
G3DSA:2.60.120.260
STR
247–382
G3DSA:2.60.120.260
QBX31457.1
1 536
Architecture
STR
STR 14-536
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX31457.1
1 536
Domain Start End Length (AA) Confidence
N-terminal 1 229 229 0,9197
Central domain 230 498 270 0,1923
C-terminal 499 536 37 0,9559
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-229
Central
230-498
C-terminal
499-536

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan638
[NCBI] 		2548293 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX31457.1 [NCBI]
Genbank nucleotide accession
MK448999 [NCBI]
CDS location
range 27241 -> 28851
strand +
CDS
ATGACAAGACTCGTTTCCCAACAGATTCTATCAGAGTATGTGAAGAGCCTAGAAATTGAAGCAGACAAGGTCGTTATTCCTGGCCAGCACACCCCAGTCTTTAGTTTGGATAGGTATGGGAGTCTTTCCATTGATACGCCACTCCTAAAGGTGAGAGGGGAAAGCCTAGCGACAAAAGTTGATCTTAAAGCTATCTCTTTAACCCCTGGACCAAAGGGGGATGCTGGAGCAGATGGGGTGGGCATTCAATTAAGGGAGCAGTACTACTTAGTCTCTGCACAAAAGACTAGTGTAACAGCAACAAACTCTGGTTGGAGCAAAACCATTCCCTTTCTCACCTCAACGCTTAAATATCTGTGGAACTATGAAAAAACCACTTTCACCAATGGCTCAACGACAGTAACAACACCTGTTGTCACCGGTGTATATGGGGACAAGGGTATGGATGGAAAGGCTGGTAAGGACGGAAAGACCCTTTATACTTGGCGGATGTATGCAGATAGTGACAAGGGAGAAGGACTCTCTGCCATTCCAACAGGCAAACGTTACCTTGGTCTAGCAGTCAATAAGGAGAGCGCAACCCCTTCAACCAATCCTGGTGACTATATCTGGTCATCCTTTTTTGAGGGAACGGAACTTGGTGGTCGCAATTACATTGACGATTATGCCATGAAAGCGATGACTTTTTCATCTGTTACCTCTGAGTGGAAGAAGGAGGTAATTGAAGATACGAGTTCTGTTAGTGGGGTGACTATTAAGTTGACCTGTACCAAAGCAGGTACTGGAGGCTTTCATCGGAACTTCCATGATTTAAGGAGTCGAATTGGTGCGACGATGACTTTTTCAATTGATATTAAGTGTTCAAAATCTGTCACACTCAATATGGGTTGTGAACTCGGTGGAACGAAAGCTTACGAAGTAACAACAGATTGGCAAAGGTGTGTTTCTTCATGGAAAGTAAGTAGTTATCAGTACTATTCGTATATCTTTTACTTAAAGTCAGGTTCGTGGTCAGTAGGTGATGTGGTTTATCTTAGAAATGTTCAATTGGAAGATGGCAACGTTGCTTCAGCGCCTGGGCCTTCTTTGAATGATCTTATCGCTCAGATTGATGCCAAAGCTGACAACGGGTTTATGAAGCAGCAATTAGACCTTCTAACTGAAAAGACAGAATCTCTCCGAGTGGACCTTGAAGCGAGAGCTTTGGCAAAAGAAGTAGCTGATTGGCTCAAGTCTTATAAAGAGTTTGAGAAGAATAATGAAGCTGTCCTTGCGCAATTTAATCAAGACTTTATTGATAATACGGCTCGTATCGCAGCTATTGAAGCAGATCTTAAAGCTAACAGTCTCTTGCTTAACTTTGTCAATACCTATTTGAGAGCTGGTGATAATGGGGTGATTATTGGTAAGAAGGATAACTCTGAATATATCGAATTAACCCCACAAGGGATGATTAAGTCAGCTGGTAATGCCGTTATGACGGTTACAGCTGGTGTCATTAAAATTCATCATGGGGTTTTTGTGGAGACCTTACAGGTTGGTTATTACCGACTAGAAGCCGCAAGGCATAATGCCAAGCATCTAGTTTGTCGTTTTATTGATGCCAAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
afa86e3d52d88875deb52b9c5d5479381c6021891a661860cf61db36f3e3dd62
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7042
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank