Protein

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Genbank accession
QJI52618.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAQSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTILNSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMAPNTTVDNTGRIDPSTTGFFYVKSAAFQKRWNVTVTSAGVDYTGDYTAPAAGSTSGNAEEVSGAYVAQQLRDSLVANGLPSGNVSVRGAYLFFYGLSNCVVSSDAGDTYAVVSNQSRVDQEQDLPAQLPAQADGAMCRVGTASSETAWYQFSYSTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGDSNLPEQAQRQLRGYIGANPVAVHRCAVHYAGCHGAPTSVYPRQGIADAKLQCHQYGLLAHVWRA
Physico‐chemical
properties
protein length:514 AA
molecular weight: 55168,52430 Da
isoelectric point:5,15282
aromaticity:0,08366
hydropathy:-0,23891

Domains

Domains [InterPro]
DC_0058
STR
1–465
DC_0058
IPR058003
TTP
4–450
IPR058003
QJI52618.1
1 514
Architecture
STR
STR 1-465 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJI52618.1
1 514
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9686
Central domain 139 337 200 0,2336
C-terminal 338 514 176 0,1725
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-337
C-terminal
338-514

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLC6
[NCBI] 		2723743 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJI52618.1 [NCBI]
Genbank nucleotide accession
MT197176 [NCBI]
CDS location
range 26365 -> 27909
strand +
CDS
ATGGCGCAATCATTAGAAGGTACTATTCAGAGCTTGCTGCAGGGTGTTTCCCAGCAGGTTCCGAGAGAGCGCCAACCAGGACAACTGGGGGCGCAGCTGAACATGCTAAGCGACCCGGTTTCGGGTATCCGCCGTAGACCTCCCGGCGAGATTGTCTGGGAGAGTACGATTGATAATCCGGGGCTTGACTCCCTGTTCACTGAATACGTAGAGCGTGGGACCGACGGTAGGCACCTGCTGATTAACACCAGCAACGGTAACTGGTGGCTGCTGGCTAAGAATGGAAAGACCATCCTTAATTCCGGTAATGACCCGTACTTTGTTACCACCGTAGGCCAGACCTCTTTGCAGACCGCTAGTATTGCTGGATTGACTTATATCCTGAATACTGAGATGGCTCCGAACACAACCGTGGACAATACTGGGCGTATTGACCCCAGCACCACTGGGTTCTTCTACGTTAAGTCTGCAGCATTCCAGAAACGCTGGAACGTCACCGTTACCTCTGCTGGGGTGGACTACACTGGGGACTACACCGCACCGGCTGCCGGTAGCACCAGCGGCAATGCTGAGGAGGTATCAGGTGCCTACGTTGCCCAGCAGCTGCGGGACTCTCTTGTAGCGAACGGGCTGCCCTCCGGGAACGTGAGCGTACGTGGTGCGTACTTGTTCTTCTACGGATTGAGCAACTGCGTGGTATCCTCTGACGCGGGTGATACTTACGCTGTGGTGTCCAACCAGTCCCGTGTAGACCAGGAGCAGGACCTGCCTGCACAGCTCCCAGCGCAAGCTGACGGAGCCATGTGCCGTGTAGGTACCGCTTCGTCTGAGACAGCATGGTACCAGTTCAGCTACAGTACCCGCACCTGGTCTGAGGTGGGGGCGTACGGCAGCATCACCAAGATTACGAACATGCCCAGAGAGCTCGCCGCGGATGACAACATCATTGCGCGGGATTGGGAGGGGCGCTTAGCGGGCAACGACGATAATAACAGTAATCCTGGTTTCGTCGAGAATGGTTATATCACAGGCATCGCAGCTTTCCAGGGGCGCCTGGTTCTGCTTAGCGGCAGCTCTGTGGATATGTCCGCCTCGGGCCTGTATCAGCGCTTCTACCGCTCTACTGTGACATCACTGCTGGATACGGACCGTATCAGCATTAGCTCTGCGTCTGCACAGGACTCTGTGTACCGCACCGCTGTGCAGTTCAACCGGGACTTGGTCCTATTTGCTAACAGCATGCAGGCGGTTGTGCCGGGTTCGGCAGTGCTTACGCCTACCAACGCAAGCATTAGCATTACCAGCACCTACGATTGTGACAGCCGTGTTACCCCGGTAATGGCAGGAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCGGGTATATTGGAGCTAATCCCGTCGCCGTACACCGCTGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTCGGTATATCCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
967e4b047f59456fdd9cccef9b88a7563b53734b92895260d5cc4c6b8570f6c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8084
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two Klebsiella pneumoniae phages encoding divergent depolymerases Domingo-Calap,P., Beamud,B., Mora,L., Gonzalez-Candelas,F. and Sanjuan,R. — — GenBank