Protein

View in Explore
Genbank accession
APD23942.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MKKGGYKMLLTIHDANLQKVAFIDNEKQGTLNYYDDTWTRSLATGSSTFEFTVFKKAVKSDLPLAKAYHHLNEHAFVSFKYKGKSFVFNIIIVEENEQTIKCYCENLNLELINELANPYKSNKAMTFKEYCEAMDLLNYTHLSIGINEISDYKRTLEWEGQETKLARLLSLAKRFDAEIEFDTQLNADSTIKKFSVNVYHENDDNHQGVGRVRNDVIVKYGKNIHSITRKVDKTGIFNTIRPTGKMPTVEEEPSGDKGSKSETVKNADGSTTKTTISTASDGTKSKTIVHTKVTKLADKTRITTTTTTRSDGSIEQTVTTSKKGGASTSETKVLKKPNPKEKTNTTEDVLTIEGLDEWEVKNEKGIVEFYQRGQALYAPISMQLYPSTFTHSTGELDQWTRKDFHFETDEPNELRRLGYLKLKKYCYPAITYEVDGFVDADIGDTVKVHDDGFAPLLMIQARVTDQKISFTNPVRNKTIFDNFKALENKLSADIQSAFERLFEAAKPYTIKLSTDNGVIFKNQIGQSLVTPTLYKGGKPVVVGVTWRWALDGEVTTGMTYLVRGSNVTDTVTLTVAAYIGNKEVAVDEISLVNVADGKLGTPGTPGRDGRTPYVHTAWANNATGTDGFSLDSSINKLYIGIYTDFEPNDSTDPKKYKWAKVKGDKGEKGDKGEPGQRGLDGLQGARGEQGLPGRNGADGRTQYTHIAYSNSADGTKDFSVSASDRAYIGMYVDFNSADSNTPSDYNWTLVKGADGANGVAGKAGTDGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDYRVYKWTLIKGADGTGISNVTNYYLATTVSTGITRTSAGWTTTPQPITSDKRYLWNYRVELYTNGTSKTTEPTVIGVHGEKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHIAYADNAVGGGFSQTNTNKPYIGMYVDFNAADSNNPTVYKWTKWKGEDGAQGVPGAKGADGRTPYFHRAWANSADGRDGFSTTDSTNKRYLGTLTDFNEADSQDPARYKWTALFDNVQVGGKNYIRNASFLSGENKWGKNSVNGLAYNFTHSASNKGKSGLHMFSENNTVIPRWKGIYQKFSLPQPADTPVTVSALLAKDGAPQEAHIGIHFIKDGVIARQSWLDIPVSQISNKYQRFSLSAKHNIPFDEIRVMLYVGYDKIVNLYVTDVQLEIGNVMTDFRLSDEDVQDSINSKADQSLTQEQLNALNEKSQILEAEMKAKASMEAFGELEKAYNAFVKSNADSRKKSESDLVEAGRRIDLLTTQFGGLAELKTFIDTYMKSTNEGLIIGKNDASSTIKVSSDRISMFSAGKEVMYISQGVINIDNGIFTASIQIGRFRTEQYHLNKDVNVIRYIGG
Physico‐chemical
properties
protein length:1697 AA
molecular weight: 186579,54110 Da
isoelectric point:8,23166
aromaticity:0,09900
hydropathy:-0,67920

Domains

Domains [InterPro]
DC_0002
STR
1–681
DC_0002 DC_1328 DC_1328 Coil
IPR050149
Unmapped
597–1314
IPR050149
DC_1151
STR
679–838
DC_1151 G3DSA:1.20.5.320 DC_1328 G3DSA:1.20.5.320 DC_0921
APD23942.1
1 1697
Architecture
STR
STR 1-1696 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage IPP55
[NCBI] 		1916193 No lineage information
Host Streptococcus pneumoniae
[NCBI] 		1313 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD23942.1 [NCBI]
Genbank nucleotide accession
KY065493.1 [NCBI]
CDS location
range 28619 -> 33712
strand +
CDS
TTGAAGAAAGGTGGATATAAGATGCTTTTGACAATCCATGATGCAAATTTACAAAAGGTAGCATTTATTGATAACGAAAAACAAGGTACGTTAAATTATTACGATGATACTTGGACAAGAAGTCTTGCAACAGGTTCGTCAACGTTTGAGTTTACGGTATTTAAAAAGGCTGTAAAGTCTGATTTACCTCTTGCTAAAGCCTATCATCATTTGAATGAGCATGCATTTGTCTCATTTAAGTACAAGGGTAAAAGCTTTGTGTTTAATATCATTATTGTTGAAGAAAATGAGCAGACAATCAAATGTTATTGTGAAAATCTCAATCTTGAGTTAATCAATGAGCTTGCGAACCCTTATAAATCTAACAAAGCGATGACTTTCAAAGAGTATTGTGAGGCGATGGATCTTTTAAATTATACTCACCTTTCTATTGGTATCAATGAAATATCAGATTATAAGCGTACTCTGGAATGGGAGGGGCAAGAAACCAAACTAGCCCGTCTATTAAGCCTAGCCAAACGATTTGATGCTGAGATTGAATTTGATACACAGTTAAATGCTGATAGCACTATCAAAAAGTTTAGTGTTAATGTTTATCATGAAAACGATGACAACCATCAAGGGGTGGGACGTGTAAGAAATGATGTCATTGTTAAATACGGAAAAAACATCCACTCTATTACAAGAAAAGTGGATAAGACTGGTATTTTCAATACAATCAGACCGACTGGTAAAATGCCAACGGTTGAAGAAGAACCGAGCGGAGATAAGGGCTCCAAAAGCGAAACTGTAAAAAATGCAGATGGTTCAACGACGAAAACCACAATCTCTACAGCCTCAGATGGGACTAAGAGCAAAACTATTGTCCACACTAAAGTTACAAAGTTAGCGGACAAGACACGGATCACAACGACCACAACGACTCGTTCTGATGGTTCCATAGAACAAACTGTTACAACCAGCAAAAAAGGCGGAGCATCAACGTCTGAAACAAAAGTCTTGAAAAAACCAAATCCAAAAGAAAAAACAAATACAACTGAGGATGTTTTGACGATTGAGGGATTGGATGAATGGGAAGTAAAGAACGAGAAAGGGATAGTTGAATTTTATCAAAGAGGGCAAGCACTGTATGCGCCTATTTCAATGCAACTATATCCCTCAACCTTTACTCATTCAACAGGGGAGCTTGACCAGTGGACAAGAAAAGATTTTCATTTTGAAACAGATGAGCCAAACGAGTTAAGACGTTTAGGTTATCTCAAATTGAAAAAGTATTGTTATCCAGCTATCACTTATGAAGTTGATGGCTTTGTCGATGCTGATATTGGAGATACTGTTAAAGTCCATGATGACGGTTTTGCCCCTCTATTGATGATTCAAGCACGGGTTACTGATCAAAAAATCAGTTTCACAAATCCAGTGAGAAATAAGACAATATTTGACAATTTCAAGGCACTTGAAAACAAACTATCAGCTGATATCCAGTCAGCCTTTGAGAGATTGTTTGAAGCTGCTAAACCATATACTATCAAATTGTCAACGGACAATGGTGTTATCTTTAAAAATCAGATCGGCCAGAGTCTAGTAACCCCAACCTTATACAAGGGAGGAAAACCAGTCGTTGTTGGTGTTACTTGGCGATGGGCACTTGATGGAGAAGTAACAACAGGGATGACTTACTTAGTTAGAGGCTCAAATGTAACTGATACAGTTACTCTGACAGTTGCAGCTTACATTGGAAATAAAGAGGTTGCTGTTGATGAGATATCGCTTGTTAATGTTGCTGATGGAAAACTTGGTACACCTGGAACTCCAGGGCGAGATGGCCGTACTCCTTATGTCCATACAGCATGGGCTAATAATGCAACAGGAACAGATGGATTTAGTCTTGATAGCTCAATCAATAAACTCTATATTGGTATTTATACAGACTTTGAACCAAACGATAGCACAGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGAGACAAGGGAGAAAAAGGAGATAAAGGAGAACCGGGACAACGTGGTTTAGATGGCTTGCAAGGTGCAAGAGGTGAACAAGGATTACCTGGTCGCAATGGTGCAGATGGCCGTACTCAATACACTCACATAGCTTACAGCAATAGCGCTGATGGAACTAAGGATTTTTCTGTAAGCGCCTCTGATAGAGCTTATATCGGTATGTATGTTGATTTTAATAGTGCTGATAGTAATACTCCATCTGATTACAATTGGACACTTGTAAAAGGAGCTGATGGCGCAAACGGCGTGGCAGGTAAGGCTGGTACAGATGGTAGGACACCATACTTACACATAGCTTACGCCACATCAAATAATGGATCACAAGGTTTTTCAACTACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGCACAGATTACAGAGTGTATAAGTGGACGTTGATAAAAGGGGCAGATGGTACTGGTATTTCTAATGTAACTAATTATTATTTAGCTACTACAGTCTCAACAGGTATCACAAGAACAAGCGCAGGGTGGACAACTACGCCACAGCCTATCACATCAGACAAGCGTTATTTATGGAATTATCGAGTTGAGCTATACACAAACGGTACAAGTAAGACAACAGAGCCTACTGTTATTGGTGTGCACGGGGAAAAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTGCAAGGTGCACGAGGTGAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGTCGTACACAATATACTCACATGGCCTATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGGGTGTACATTGACTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAAGGTCGTGATGGCGCAAACGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGGACACCATACTTACACATAGCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCAACTACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGCACAGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGGGACAAGGGAGAAAAAGGCGATAAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTGCAAGGTGCACGAGGTGAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGCCGTACACAATATACTCACATGGCCTATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGGGTGTACATTGACTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAAGGTCGTGATGGCGCAAACGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGGACACCATACTTACACATAGCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCAACTACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGCACAGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGGGACAAGGGAGAAAAAGGCGATAAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTGCAAGGTGCACGAGGTGAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGAAGAACCCAGTACACTCATATTGCTTACGCAGATAATGCAGTTGGAGGAGGTTTTAGCCAAACTAATACCAATAAGCCATATATTGGTATGTATGTCGATTTTAATGCTGCAGATAGTAATAATCCGACAGTTTATAAATGGACAAAGTGGAAAGGTGAAGATGGTGCGCAAGGTGTACCAGGAGCAAAAGGAGCAGATGGTAGAACACCGTATTTTCATCGAGCATGGGCAAATTCTGCTGATGGCCGTGATGGTTTCAGTACAACTGATAGCACAAATAAGCGTTATTTAGGTACGCTAACGGATTTTAACGAGGCTGACAGTCAGGATCCTGCAAGGTACAAGTGGACAGCTCTTTTTGATAATGTCCAGGTAGGTGGAAAAAACTATATCAGAAACGCCTCGTTTCTCTCTGGGGAGAATAAATGGGGCAAAAATTCTGTAAATGGACTAGCGTATAATTTCACTCACTCTGCATCTAATAAAGGTAAGTCAGGCTTACATATGTTTAGCGAGAATAACACTGTTATTCCTCGCTGGAAAGGGATATATCAAAAGTTTTCATTGCCTCAACCAGCAGACACTCCAGTCACTGTTTCGGCTTTGCTTGCGAAAGATGGAGCGCCTCAAGAGGCTCATATTGGAATCCATTTTATAAAAGATGGAGTTATTGCCAGACAATCGTGGCTTGATATACCTGTTTCCCAAATCAGCAACAAATACCAACGTTTTTCTCTTTCAGCAAAGCACAATATACCTTTTGATGAAATCAGAGTCATGCTCTATGTTGGATATGACAAAATTGTCAATCTGTATGTTACAGATGTTCAGCTTGAAATTGGCAATGTAATGACTGATTTTAGATTATCAGACGAAGATGTACAAGATAGCATCAACTCAAAAGCTGACCAATCACTGACTCAAGAGCAGTTGAATGCTCTTAACGAGAAGTCACAGATTTTAGAGGCTGAAATGAAAGCAAAAGCATCGATGGAGGCCTTTGGTGAATTAGAAAAAGCATATAATGCCTTTGTGAAATCAAATGCAGATAGTCGAAAAAAATCTGAGTCTGATTTAGTTGAAGCAGGTAGAAGAATTGATTTGCTGACGACACAATTTGGAGGATTAGCAGAGCTTAAAACATTCATTGATACTTACATGAAAAGCACAAATGAGGGCTTGATTATAGGCAAGAATGATGCAAGCTCTACTATTAAAGTATCAAGTGATAGAATATCCATGTTTTCTGCAGGTAAGGAAGTTATGTACATTTCGCAAGGTGTAATAAATATTGATAATGGTATTTTTACTGCATCAATTCAAATTGGACGTTTTAGAACAGAACAGTATCATCTTAACAAAGATGTGAATGTCATACGATATATAGGAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e59314d86b7d03e02093c805ea53d1c73f75cf57a4f089caf5dab2ef99ac893
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7630
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50