Protein

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Genbank accession
YP_010302896.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MSLVKVKSSQISTGSSASSSILRAQNSKLVVSSLESTATAEITEGVYDETSGVLSLTFANGDTVNVKGFPTASDIPVGRQGGRGETGADGKDGRDGRDGAPGEPGCTGPDGNEGQQGRPGKDGRPGLPGPDGGRGPTGVPGPDGGTGPTGPRGGTGPTGATGATGPTGPTGAPGPSGRLSIIVSATNPGNVAAGTVWVNPNIDQGSVWP
Physico‐chemical
properties
protein length:209 AA
molecular weight: 20184,67010 Da
isoelectric point:4,95917
aromaticity:0,02392
hydropathy:-0,53206

Domains

Domains [InterPro]
DC_1842
ATT
1–76
DC_1842 PTHR24637
IPR008160
STR
77–132
IPR008160
DC_0656
STR
125–209
DC_0656
YP_010302896.1
1 209
Architecture
ATT
STR
ATT 1-76 | STR 77-209
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_5
[NCBI] 		2797313 Uroviricota > Caudoviricetes > Rivsvirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010302896.1 [NCBI]
Genbank nucleotide accession
NC_061450.1 [NCBI]
CDS location
range 68910 -> 69539
strand -
CDS
ATGAGTCTCGTAAAAGTAAAAAGTAGTCAAATCAGCACCGGAAGCTCCGCCTCCTCAAGTATCCTACGAGCACAGAACAGCAAGCTGGTTGTGTCTAGCCTTGAATCTACTGCCACCGCTGAAATCACAGAAGGTGTGTATGATGAAACAAGTGGCGTGCTCAGCCTGACGTTTGCTAACGGCGATACTGTCAACGTCAAAGGGTTTCCCACAGCAAGTGATATCCCTGTAGGTCGTCAGGGTGGTCGTGGTGAGACAGGCGCTGATGGTAAAGATGGTCGTGATGGACGAGACGGTGCCCCGGGTGAGCCTGGCTGTACGGGTCCTGATGGTAATGAAGGCCAACAAGGACGTCCTGGTAAAGATGGGCGTCCTGGTCTGCCTGGCCCAGATGGCGGACGCGGTCCCACAGGCGTTCCTGGCCCTGATGGTGGTACGGGTCCTACTGGCCCTCGTGGCGGTACGGGTCCTACAGGCGCTACAGGTGCAACGGGTCCTACAGGCCCAACTGGTGCTCCAGGTCCAAGTGGTCGTCTGTCAATCATTGTCAGCGCTACTAACCCAGGCAACGTAGCAGCAGGAACTGTATGGGTTAACCCGAATATCGATCAAGGTTCAGTTTGGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
187886dc6cc47f566ace24d515b3e9047b71aa8284bcf77dd0899373bfee935a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7210
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_5 Kim,S.G., Lee,S.B., Kwon,J. and Park,S.C. 2021-01-07 — GenBank