Protein

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Genbank accession
XYR93283.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,50
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MDYPMTILQTLYPIPDNVPRTDASFNTFTGVNRFTRVVAGNSTPNEAYDLCAGTTKIGSTLTVIGDTTLNIAKAALLTITGSNAMIFQGFGSSQGRITLFGWLGVDSGDTLAIIDRVGMSNYRWALSASQMTLNDNAVWHAGNFNPDLYLKVADASSTYVKLANSNNNITGTVWGLRSVTASGSDTLSIQIQSGGAYQYGRGAVLELNGKNATGSNAGGFRLLSDGPSAINSYSGTLSLAASGGGQITFNSSGLSLQGATSVAGATTFASTVAVTGLITATGQLKVGPASGEARINFGLDTGYIYSSATSIGYYWPGSSAVNLWRLIKPGQSEGVYPALSMIVSGGGYFDGIVRATSSLISIHPDALRMRQSARTVIHRFDGNAYYWLRTAADDPDGVWDSARPMTYNVGGDQLTFNPAGGVTMQTQLTLSFNAPFRLTGFGAAGAIYIHGTNGAGDDVCSILRNNANSNYTLTWNGGVTITGAQTVAGEAYCNNWFRSNSSGTGWYHQVHGGGWYMSDNDYVRSYNQKAVAGSDFVIWSDRRSKTEDRDLNITDVLPKFMGLAPKWYVKNGTKAEYGMFAQDVRALFPDMVSLTNNEGYDDYHFLWINMLHAPHILVTQDNVRRIEELEGIVASQQHQIAQLQSRLEV
Physico‐chemical
properties
protein length:649 AA
molecular weight: 69579,73880 Da
isoelectric point:5,93765
aromaticity:0,10324
hydropathy:-0,13713

Domains

Domains [InterPro]
DC_1248
STR
8–649
DC_1248
IPR007001
RBD
474–531
IPR007001 IPR030392
IPR030392
CHP
540–592
IPR030392 Coil
XYR93283.1
1 649
Architecture
STR
STR 8-649
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage PhiXhv-15
[NCBI] 		3447917 Viruses >
Host Xanthomonas hortorum pv. vitians
[NCBI] 		83224 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas hortorum

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR93283.1 [NCBI]
Genbank nucleotide accession
PV764602 [NCBI]
CDS location
range 202584 -> 204533
strand +
CDS
GTGGACTATCCAATGACGATTCTTCAAACGCTGTACCCAATCCCGGATAACGTCCCACGAACTGATGCTTCGTTCAACACCTTCACTGGGGTCAACCGATTCACTAGGGTGGTGGCAGGTAATTCAACCCCGAACGAAGCATACGATCTATGTGCTGGGACTACAAAGATCGGAAGCACCCTAACCGTTATTGGCGATACTACGCTCAACATTGCCAAAGCTGCGTTACTGACAATTACGGGTAGTAACGCCATGATCTTCCAAGGCTTTGGAAGCTCTCAGGGCCGTATCACCCTGTTCGGTTGGCTAGGTGTCGATTCCGGCGATACTCTGGCCATCATCGACCGCGTAGGTATGTCCAACTATCGCTGGGCGCTCAGTGCAAGTCAGATGACGCTCAACGATAATGCTGTGTGGCATGCAGGCAACTTCAATCCCGATCTGTACCTCAAGGTCGCTGACGCGTCTTCTACTTACGTCAAGCTTGCCAACAGTAACAACAACATCACGGGCACGGTGTGGGGACTTCGCTCGGTCACTGCATCGGGCTCCGACACCTTGTCCATACAGATTCAGTCGGGCGGTGCCTATCAGTACGGACGTGGCGCTGTATTGGAATTGAATGGCAAGAACGCAACTGGCAGCAACGCTGGCGGCTTCCGTCTGCTCAGTGACGGTCCCTCGGCGATCAATTCGTACTCCGGCACTCTATCCCTAGCTGCCTCGGGCGGTGGTCAGATTACGTTCAACAGCTCCGGCCTGTCTCTGCAAGGGGCCACGAGTGTTGCAGGTGCAACCACATTTGCCTCTACGGTAGCAGTTACTGGCCTCATCACTGCCACTGGCCAACTAAAGGTTGGGCCTGCTTCCGGCGAAGCGCGTATCAACTTTGGTCTGGACACGGGCTACATCTACAGTAGTGCCACCTCAATTGGCTACTATTGGCCCGGTAGTAGCGCTGTCAACTTGTGGCGTCTTATTAAACCGGGCCAAAGCGAAGGTGTTTACCCTGCCTTGTCTATGATCGTGTCGGGAGGGGGTTATTTCGACGGTATTGTTCGGGCTACCTCTAGTCTCATCAGCATCCACCCGGACGCCCTGCGTATGCGGCAATCCGCCCGCACCGTTATTCACCGCTTTGACGGCAACGCTTATTACTGGCTTCGTACTGCGGCTGACGACCCCGATGGTGTCTGGGATTCCGCACGTCCTATGACCTATAATGTTGGTGGGGACCAGTTGACGTTCAACCCTGCTGGTGGCGTAACCATGCAGACCCAGCTGACACTTTCCTTTAATGCGCCATTCCGACTCACGGGCTTTGGTGCAGCAGGCGCTATATACATTCACGGTACCAATGGTGCAGGCGATGACGTTTGCAGCATCTTACGCAACAATGCCAACTCTAACTACACGCTGACGTGGAACGGTGGTGTCACGATCACTGGTGCTCAGACAGTAGCAGGCGAAGCTTACTGCAACAATTGGTTCCGCAGCAATAGCTCCGGCACTGGCTGGTATCATCAGGTACATGGCGGTGGTTGGTACATGTCGGATAACGATTACGTGCGTTCGTACAATCAGAAGGCAGTGGCTGGCTCTGATTTCGTGATTTGGTCTGATCGCCGTTCCAAGACCGAAGACCGTGACTTGAACATTACTGACGTTCTTCCCAAATTCATGGGACTTGCCCCAAAGTGGTATGTCAAGAATGGCACGAAGGCCGAGTACGGCATGTTCGCACAGGACGTGCGCGCACTGTTCCCCGATATGGTCAGCCTGACCAACAACGAAGGATATGACGATTACCACTTCCTCTGGATTAACATGCTTCATGCTCCCCACATTCTTGTGACCCAGGATAACGTGCGCCGCATCGAAGAACTGGAGGGTATCGTGGCCTCGCAGCAGCATCAGATCGCGCAGCTGCAATCTAGGCTTGAGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3e2976efed6abc718a8213e4fed58e62f44bf291e0b9986bef48038507954aef
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5757
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50