Protein

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Genbank accession
XDG30823.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MTYPATNSKEASELLIDVSNQMHEIVNEDATTEVMTESGLVPSVRKALADTFLFQDPIAWNQGSDETAFNQLRTFNGSIYWAPTATTLNPIPMGATPIGDSNWKLAPVDVSREWTLQELTRSQNEVIGGKIFPLDDAVLQNGDTVPAGTTHLRVDIGGEPTIVAMSPVASGNVGSLTETGATIGATSVIFIPFKSSFTFRFGSIANMLAGIPVRSEVGDICIVLDTIFKHESGSGFTITDFKPLSYRGGEAYEKTTIESLRNELSGVVDPTLLQYGCRKQINNPDFTDTIEDVANFAGQTLGAAAPIGWIHHHYTDGIMHQWDNVGDGTILFLKNAQNPGRRPDKDPSYVGQGKFLSIGTEGFIGAGSERMFLSKDAEWVYRRRQPAFFFSDLDPADGDGFAFNKTCYRGMELVEKWRSGGVDLAYVRNASGTPQIRLFKNGAFATDGTVLDLNTQSGGVIRIVTGPRSDIAGGAGDLKLSPGPDDANNVIHLDGGVKLKQFATASLPVLAANERGIAWDSTLNALVKWDGTSWSAV
Physico‐chemical
properties
protein length:537 AA
molecular weight: 57901,19380 Da
isoelectric point:4,84174
aromaticity:0,08939
hydropathy:-0,18417

Domains

Domains [InterPro]
DC_0194
STR
1–534
DC_0194
IPR058969
ATT
7–105
IPR058969
XDG30823.1
1 537
Architecture
ATT
STR
ATT 1-105 | STR 106-534 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDG30823.1
1 537
Domain Start End Length (AA) Confidence
N-terminal 1 241 241 0,8807
Central domain 242 440 200 0,0543
C-terminal 441 537 96 0,9354
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-241
Central
242-440
C-terminal
441-537

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage P018-4
[NCBI] 		3229728 Uroviricota > Caudoviricetes >
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
3a42bce66a4e9e7aed5d4c19d7a046ecd366ef312b24da996db25e835af08911
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4864
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50