Protein

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Genbank accession
YP_012319359.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,58
Protein sequence
MTVTEEALDTWKNKINGLPYAFYLYYLDNQLDFDDQYSQVIGNATGLVSVVYTPFLKGIDLDLARIPYDTERFGELDKIRPELNTKPMVFRIKNLLNPSKFIAKFKTYPEKDVIIERHWKNESKLLQYPYSFIHISDGLNPPLVLKPELCPYECDLGVKLSLSERGSYSFFVQNYKGDTHGFIEALVSTDGNELPSTESQYANWIATSKNQTQQAVKASLINNNRDYKYNQEAEQIGKYAGTFDSGLGVLGSILSLNPIGGIRAGMSGVYNYFERDMNTRKNVETWSDNKQNIIQSNLAKSSDMKTAPNTLVSQGSNIMYGLRNNDRKVKLYRYGITEEYAQRLGDYFALYGYKQNKMMKPDLRSRLNYNYVKMLQCNMKTKNIPQSHLEELKGIFERGIRLWHVDDMAVYSVGDYSKDNSERQFRD
Physico‐chemical
properties
protein length:427 AA
molecular weight: 49223,10830 Da
isoelectric point:8,09931
aromaticity:0,11944
hydropathy:-0,60070

Domains

Domains [InterPro]
DC_0687
ATT
1–104
DC_0687 IPR048710
IPR048710
STR
120–413
IPR048710
YP_012319359.1
1 427
Architecture
ATT
STR
ATT 1-104 | STR 105-420 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage DCp1
[NCBI] 		2981543 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012319359.1 [NCBI]
Genbank nucleotide accession
NC_108347.1 [NCBI]
CDS location
range 12452 -> 13735
strand -
CDS
ATGACAGTAACAGAGGAAGCACTGGACACATGGAAAAATAAAATTAACGGTTTACCGTATGCTTTTTATCTTTATTATTTAGATAATCAACTTGATTTTGACGACCAATATTCTCAAGTTATTGGTAATGCTACTGGTTTGGTTTCAGTTGTTTATACACCTTTTTTAAAAGGGATTGATTTAGATTTAGCAAGGATTCCATATGATACAGAAAGATTCGGGGAACTAGATAAAATAAGACCTGAATTAAACACAAAACCAATGGTTTTTAGAATTAAAAATTTATTAAATCCTAGTAAATTTATTGCTAAATTTAAAACATACCCTGAAAAAGATGTAATCATTGAAAGACACTGGAAAAATGAAAGTAAATTATTACAATATCCATATTCTTTCATTCATATTTCAGATGGATTAAATCCACCATTGGTTTTAAAACCTGAATTATGTCCGTATGAATGTGATTTAGGCGTTAAACTTAGCTTATCAGAACGTGGAAGTTATTCATTTTTTGTACAAAATTATAAAGGTGATACACACGGTTTTATAGAAGCTTTAGTATCAACAGATGGTAACGAATTACCATCAACTGAAAGTCAATACGCTAATTGGATAGCAACAAGTAAAAACCAAACTCAACAAGCGGTTAAAGCTAGTTTAATTAATAACAATAGGGATTATAAATATAATCAGGAAGCTGAACAAATAGGTAAATATGCTGGTACTTTTGATAGTGGTTTAGGTGTACTTGGTTCTATCCTTTCACTTAATCCTATTGGAGGGATTAGGGCTGGAATGTCAGGAGTTTATAACTACTTTGAAAGAGATATGAATACAAGAAAAAATGTGGAAACATGGTCAGACAACAAACAAAATATTATTCAATCTAATTTAGCAAAAAGTAGTGACATGAAAACAGCCCCTAATACTTTAGTTTCTCAAGGTTCTAATATAATGTATGGTTTGAGAAATAATGACAGAAAAGTAAAACTATACCGTTACGGAATAACTGAGGAATACGCTCAAAGATTAGGTGATTATTTTGCATTATATGGTTACAAGCAAAATAAAATGATGAAACCTGATTTAAGAAGTAGATTAAATTACAATTATGTAAAAATGCTTCAATGCAATATGAAAACTAAAAATATTCCTCAATCTCATTTAGAAGAATTAAAAGGAATTTTTGAACGTGGTATCAGGTTATGGCACGTTGATGATATGGCAGTATATAGCGTGGGGGATTATTCAAAGGATAACTCTGAAAGACAATTTAGAGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
198405f1cc78a28f23b1c2355192019be866492d9227548f6ffac6bea152be18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2874
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel Clostridium perfringens phage DCp1 Tang,Z. 2023-02-20 — GenBank