Protein

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Genbank accession
WQM42330.1 [GenBank]
Protein name
side tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKARHDQLLTALRALLLSRKNPFGDIKSDGTVQTALENLGLGEAAKRDVGTGDNQIPDMGAFASGSGWFRLPGGYIVQFGTFSGNTTRFISGHFPIPFPNQPMVSVSVMSDAVQSDPSHPAPQVLSVNFEHISNSAWRVATSDISQQYRFSYISIGR
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23288,67190 Da
isoelectric point:5,69086
aromaticity:0,08837
hydropathy:-0,37442

Domains

Domains [InterPro]
DC_0512
STR
1–193
DC_0512
G3DSA:2.60.40.3940
RBD
120–214
G3DSA:2.60.40.3940
IPR054075
RBD
128–215
IPR054075
WQM42330.1
1 215
Architecture
STR
RBD
STR 1-193 | RBD 194-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SKA5
[NCBI] 		3093925 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQM42330.1 [NCBI]
Genbank nucleotide accession
OR670062.1 [NCBI]
CDS location
range 21926 -> 22573
strand -
CDS
ATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACTGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAGCTTTGCAGCGTTGTAGAGGCATCCGGTGCCAGTCTCGAGAAGGCGCGGCACGACCAGCTGCTTACCGCACTTCGTGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGCGGCGAAAAGGGATGTGGGCACAGGAGATAATCAGATACCGGATATGGGAGCATTCGCTTCTGGTTCGGGATGGTTCAGGCTACCAGGTGGATATATTGTTCAGTTTGGCACTTTTTCAGGAAACACGACCCGCTTTATCAGTGGACACTTCCCTATACCATTCCCTAATCAGCCGATGGTTTCAGTCAGTGTTATGTCTGATGCCGTTCAGTCAGATCCGTCGCATCCTGCCCCGCAGGTTTTGTCTGTAAATTTTGAACATATCAGTAATTCAGCGTGGCGTGTGGCAACCAGTGATATCTCACAGCAATACAGATTCAGTTATATTTCGATAGGACGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a82e6de8e34f9257af4f404eeb21d6d625dcd9bef9d1929fb6ad88886ed94d1b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7818
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50