Protein

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Genbank accession
QLI49478.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTVFRLRDGLTPLLSGESTGDLRMTGFARPGYAISPDGQKVVVTNGAGGTGNFLYSDEGPTEQHIFPSAKTATANFNGAINAIAAGDEFFAVGGSTPFLYILDWSGNLQSVNVTGIAQVRNLAFSPDGLRLAVLHASAPYLRIYNTSDWSFVNVASGLGGASSNYNDLYFTGDGRLVVGSTVAPYLATVNLATGAILNSISSAVSLNSVSGLMKHPDSNQLIWVGSSSSSASKHIGVYDLDSYQLSLPFADIGTTIWSAVLDKVNREIIFLHSDALGRNCSIIKLDEPSVIHDPGDDIKSHVTGTPSPQGLVILERDIARINGTVRDIDNLPAARRVIAFHREGGYMAASTMSDPSTGDYELIVENTDLHDVQFRVEEGELLNDLFFARVEPEAV
Physico‐chemical
properties
protein length:395 AA
molecular weight: 42134,58610 Da
isoelectric point:4,76233
aromaticity:0,08354
hydropathy:0,01291

Domains

Domains [InterPro]
SSF63829
STR
31–243
SSF63829
IPR015943
STR
31–362
IPR015943
DC_1745
RBD
130–394
DC_1745
IPR011044
ATT
190–356
IPR011044
QLI49478.1
1 395
Architecture
STR
ATT
RBD
STR 31-189 | ATT 190-362 | RBD 363-394 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLI49478.1
1 395
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,9505
Central domain 18 232 216 0,5195
C-terminal 233 395 162 0,1838
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-232
C-terminal
233-395

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_USP_25
[NCBI] 		2743939 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLI49478.1 [NCBI]
Genbank nucleotide accession
MT491208 [NCBI]
CDS location
range 13696 -> 14883
strand +
CDS
ATGACGGTCTTTCGCTTACGCGACGGCCTCACTCCGCTGCTTTCAGGTGAGAGTACGGGTGATCTCCGAATGACGGGTTTCGCTCGGCCGGGTTATGCCATTTCCCCAGACGGGCAAAAGGTTGTGGTCACGAATGGTGCTGGCGGCACAGGCAACTTCCTGTACTCGGATGAGGGGCCGACCGAGCAGCACATCTTTCCTTCGGCCAAGACCGCCACGGCAAACTTCAATGGCGCGATCAACGCCATCGCGGCCGGCGATGAGTTCTTTGCCGTGGGTGGCTCAACCCCGTTCCTGTACATCCTTGACTGGAGCGGGAACCTTCAGTCGGTGAACGTAACTGGAATAGCTCAGGTGCGGAACCTGGCCTTCAGTCCAGACGGGCTGCGCCTGGCGGTCCTGCACGCTTCTGCGCCCTATCTGAGGATCTACAACACAAGCGATTGGTCGTTCGTCAACGTAGCGTCCGGCTTAGGCGGCGCCAGCTCAAACTATAACGACCTGTATTTCACAGGCGATGGCCGCCTGGTTGTTGGAAGCACGGTGGCGCCGTACTTGGCGACTGTCAATCTTGCCACTGGCGCGATACTGAACTCGATTTCAAGTGCCGTCTCGCTGAATAGCGTATCAGGACTCATGAAGCACCCCGACAGCAACCAGCTTATATGGGTGGGATCTTCTTCATCGTCAGCGTCTAAGCATATCGGTGTCTATGATCTCGATTCGTACCAGCTTAGCCTTCCCTTTGCTGATATCGGCACTACGATTTGGTCCGCCGTTCTTGATAAGGTGAACCGGGAGATCATTTTCTTGCATAGTGACGCGCTGGGTCGCAATTGCTCGATCATCAAGCTTGATGAGCCATCGGTGATTCACGATCCGGGTGACGACATCAAATCGCATGTGACCGGCACCCCCTCGCCACAGGGCCTCGTGATACTGGAGCGTGATATTGCACGGATCAACGGTACGGTCCGCGATATTGACAACCTTCCTGCTGCGCGTCGTGTGATCGCCTTCCATCGAGAGGGTGGCTATATGGCGGCGTCCACCATGTCCGATCCATCTACAGGGGACTATGAGCTGATCGTGGAGAACACGGACTTGCATGACGTTCAGTTCCGCGTCGAGGAAGGCGAGCTGCTTAACGATCTTTTCTTTGCTCGCGTAGAACCAGAGGCCGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8f84516dab9be8332e2fc5b650152ffca8f83b558478cc5b49ade51c1f1db7fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and characterization of new bacteriophages to control multidrug-resistant Pseudomonas aeruginosa biofilm on endotracheal tubes Oliveira,V.C., Bim,F.L., Macedo,A.P., Monteiro,R.M., Santos,E.S., Silva-Lovato,C.H., Paranhos,H.F.O., Melo,L.D.R., Santos,S.B. and Watanabe,E. — — GenBank