Protein

Genbank accession
WGL30917.1 [GenBank]
Protein name
major capsid protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGVFSRSQGPANDVKRNGFDGSFQNHFTFNFGQLVPCFCKEVGPGDTFEINSAMGLNFMPTVFPVQSKINATCHFFYVRGKNLWKDYYDWYFGTKQGLVPPTISPKSFRNKALTGSIYDYMGLPTTISSGSYGDLIKINPVDGWGVYDSSTKLTSFYPLSIAGSSPYQYYQWITTDDIAEVSSNASVRDFYSSTNGFDVYSYTASNTGVESEGQCNLISSGLFVAKNSPTDELRKALFCGDGSVIYYGFRFGSNYKFVTEDFDNQRVFHLRGKIAPGFSFAVSKKIVITVASSVASGEPVLASVEAQNVVFDYKNLTFDCDFNFRPSQKPFLGGKYFNLFAYIALDFSDRTVIQTSNLNNLIVRSSSPATDFVLTLPSTAVLGTSRDIGFEDANVFSSGAVTINALPFRAYESIYNAFYRDARNNPFTINGKVEYNKFITSDEGGIDNFNYEIRYRNWENDFLTTAQPTPQFGIAPLVGITSSGTMSFSASEDGKTYNVQANVGSDGTTIDSVSYSENLPSSVRRSLVDVVSSGISINDFRNVNAFQRFLETSMRRGLKAFDQIKAHFNVDVDEKLLDMPEFIGGFNTVVSAQKVDSTVETPGSPLGSYAGQLSALSGQKHGIKCFCDQPGYIIGIVCCHPVPLYSQLLPKMFLKVNSLDNYMPEFGQIGMQPILMREVAPVQAWKDDPETLTNVFGYQRAWYDLLSNVDEVHGLFRTQLRNFVLNRVFDSAPKLGPDFTIIDPKHLNDIFSVTVDNDEEVNHKILAKVVFDLKMIRPIPKFGIPKLEPNV
Physico‐chemical
properties
protein length:791 AA
molecular weight: 87935,94330 Da
isoelectric point:5,41121
aromaticity:0,13274
hydropathy:-0,17459

Domains

Domains [InterPro]
IPR003514
9–129
IPR003514 IPR037002
IPR037002
10–142
IPR037002 IPR016184
IPR016184
10–125
IPR016184 IPR003514
WGL30917.1
1 791
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dipodfec virus UOA04_Rod_524
[NCBI] 		3038703 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGL30917.1 [NCBI]
Genbank nucleotide accession
OQ686873 [NCBI]
CDS location
range 1 -> 2376
strand +
CDS
ATGGGTGTTTTTTCACGTTCCCAAGGTCCTGCGAATGATGTCAAGCGCAATGGTTTTGACGGTTCATTCCAAAATCATTTTACATTTAACTTCGGTCAGCTCGTTCCTTGCTTCTGTAAGGAAGTCGGTCCCGGAGATACTTTTGAAATTAATTCCGCTATGGGGTTAAATTTTATGCCTACTGTTTTCCCCGTTCAATCCAAGATTAATGCTACTTGTCATTTTTTTTATGTCCGAGGTAAAAATCTTTGGAAAGATTACTATGACTGGTATTTTGGTACTAAACAAGGTCTTGTGCCTCCTACTATTTCGCCTAAATCTTTTCGTAATAAGGCTTTGACTGGTTCTATATATGATTATATGGGCTTGCCTACTACTATTTCTTCGGGTTCTTATGGTGATTTAATCAAAATTAATCCGGTTGACGGTTGGGGTGTTTATGATTCTTCTACTAAGTTAACGTCTTTTTATCCTCTTTCTATAGCTGGGTCTTCTCCTTATCAGTATTATCAATGGATTACTACTGATGATATTGCTGAAGTTTCATCTAATGCTTCCGTGCGTGATTTCTATTCAAGCACTAATGGTTTTGATGTGTATTCTTATACTGCTTCGAATACTGGTGTTGAGTCTGAAGGTCAGTGTAATTTAATTAGCAGTGGTCTTTTTGTTGCAAAAAATTCTCCTACTGATGAACTTCGTAAGGCTTTATTTTGTGGTGATGGCTCGGTGATTTATTACGGTTTTCGTTTTGGTAGCAATTATAAATTTGTTACCGAGGATTTTGATAATCAACGTGTTTTTCATTTACGGGGTAAAATTGCTCCCGGCTTTTCTTTCGCTGTTTCTAAAAAGATTGTTATTACTGTTGCTTCTTCGGTTGCGTCCGGTGAGCCGGTTCTTGCTTCAGTTGAGGCTCAAAATGTTGTTTTTGATTATAAAAATTTAACTTTTGACTGTGATTTTAATTTCCGTCCTTCTCAAAAGCCATTTTTAGGCGGTAAGTATTTTAATCTTTTTGCTTATATAGCTTTAGATTTTTCAGATAGGACTGTTATTCAAACTTCCAATTTGAATAATTTGATTGTTCGTAGTTCATCTCCTGCTACTGATTTTGTGTTGACTCTTCCTAGTACTGCTGTTCTTGGAACTTCCCGTGATATAGGTTTCGAGGATGCTAATGTGTTCTCTTCTGGTGCTGTTACAATCAATGCTCTTCCTTTCCGTGCTTATGAGTCCATTTACAATGCTTTCTATCGTGATGCCCGTAATAACCCATTTACTATTAATGGTAAAGTTGAGTATAATAAGTTTATAACTTCTGATGAAGGTGGTATAGATAATTTTAATTATGAGATACGTTATAGGAATTGGGAGAATGATTTTCTTACGACTGCACAGCCTACTCCACAATTTGGTATCGCTCCTCTTGTCGGTATTACGTCTTCCGGTACAATGTCTTTCTCTGCATCCGAAGATGGTAAAACGTATAATGTTCAGGCTAATGTTGGTTCAGATGGTACGACAATCGATAGCGTATCTTATTCGGAAAATCTTCCCTCCTCTGTTAGACGTTCTTTGGTCGATGTTGTCAGTAGTGGTATATCTATCAATGACTTTCGTAATGTTAATGCTTTTCAACGTTTTTTAGAGACTTCCATGCGTCGCGGTCTTAAAGCTTTCGACCAGATAAAGGCTCATTTTAATGTTGATGTTGATGAGAAGTTACTTGATATGCCTGAATTTATTGGCGGTTTCAATACTGTTGTCTCTGCACAAAAAGTTGATAGTACTGTTGAAACTCCCGGTTCTCCTCTTGGCTCCTATGCCGGTCAGTTGTCTGCCCTTTCCGGTCAGAAACATGGTATCAAGTGTTTTTGTGACCAACCCGGTTATATCATCGGAATTGTGTGCTGTCATCCCGTTCCTCTTTATTCGCAGCTGCTTCCTAAAATGTTTTTAAAAGTTAATTCTTTGGATAATTATATGCCTGAATTTGGTCAAATAGGCATGCAGCCCATCCTGATGAGAGAGGTCGCACCCGTTCAGGCTTGGAAAGATGACCCTGAAACGTTAACAAATGTTTTTGGCTATCAACGTGCTTGGTATGATTTGTTGAGTAATGTCGACGAAGTTCACGGCTTGTTCCGTACCCAGCTGCGTAATTTTGTTCTTAACCGTGTCTTTGATTCCGCTCCAAAACTCGGCCCTGATTTTACGATTATAGACCCTAAGCATCTTAATGATATATTTTCAGTCACTGTTGATAATGATGAAGAGGTAAATCATAAGATACTTGCTAAAGTTGTATTTGACTTAAAAATGATACGTCCTATACCTAAGTTTGGTATTCCTAAACTTGAACCTAATGTTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
c36c3f2d1c954edbdd282d1890161b177dd9ed7139a7fbc6ceb0b0e80aee4ad6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2507
Evidence 0,2507
Download PDB

Literature

Title Authors Date PMID Source
Towards deciphering the DNA virus diversity associated with rodent species in the families Cricetidae and Heteromyidae Lund,M., Larsen,B.B., Gryseels,S., Kraberger,S., Rowsey,D.M., Steger,L., Yule,K.M., Upham,N.S., Worobey,M., Van Doorslaer,K. and Varsani,A. — — GenBank