Protein

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Genbank accession
WCZ56763.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,70
Protein sequence
MEVQGSLGRQIQGISQQPPAVRLDGQCSEMINMVPDVVEGTKSRMGTTHIAKLLEYGEDDMAVHHYRRGGEGEEEYFFIMKKGQVPEIFDKQGRKCMVQSQDAPMTYLSEVTNPREDVQFMTIADVTFMLNRKKVVKARPERSPQVGNTAIVFMAYGQYGTHYKIIIDGVVAAGYKTRDGAEAHHIEDIRTESIAYNLYQSLQSWDKIADYETQLDGTSIYITRRDGSTTFDITTEDGAKGKDLVAIKYKVASTDLLPSRAPEGYKVQVWPTGSKPESRYWLQAEKQNGNIVSWKETLAADVLVGFDKSTMPYIIERTGFVNGVAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCVTAGEAVIATRTSYFFDFFRYTAVSAVATDPFDVFSDASEVYQLKHAVTLDGSTVLFADKSQFILPGDKPLEKSNVLLKPVTTFEVNNNVRPVATGESVMFATSEGAYSGVREFYTDSYSDTKKAQAITSHVNKLIEGNIIMMSASTNVNRLLVLTDKYRHIIYCYDWLWQGTERVQAAWHKWEWPLGTFIRGMFYSGEHLYLLIERGSTGVYLERMDMGDALVYNLNDRIRMDRQAELIFRHIKAEDVWVSEPLPWQPTDVDLLDCVLIDGWDSYIGGSFLFSYNSGNNTLTTTFDMHDDNHVKAKVVVGQLYPQEFEPTQVVIRDNQERVSYIDVPTVGLVHLNLDKYPDFKVEVKNLKSGKVRNVLASNRIGGARNNIVGYVEPREGVFKFPLRSLSTDTVYRVMVESPHTFQLRDIEWEGSYNPTKRRV
Physico‐chemical
properties
protein length:803 AA
molecular weight: 91094,01740 Da
isoelectric point:5,45554
aromaticity:0,10585
hydropathy:-0,36687

Domains

Domains [InterPro]
DC_0058
STR
1–803
DC_0058
IPR058003
TTP
3–802
IPR058003
WCZ56763.1
1 803
Architecture
STR
STR 1-803
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCZ56763.1
1 803
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9873
Central domain 145 357 214 0,1351
C-terminal 358 803 445 0,3137
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-357
C-terminal
358-803

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K30
[NCBI] 		3027619 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ56763.1 [NCBI]
Genbank nucleotide accession
OQ291025 [NCBI]
CDS location
range 24748 -> 27159
strand +
CDS
ATGGAAGTTCAAGGTTCTTTAGGTCGCCAGATTCAAGGAATAAGCCAGCAACCTCCAGCAGTGAGGCTGGACGGTCAATGCTCAGAAATGATTAACATGGTGCCCGATGTAGTAGAGGGTACTAAATCACGCATGGGTACGACCCACATTGCAAAGCTTTTAGAGTACGGTGAAGATGATATGGCCGTCCATCATTACCGAAGAGGTGGTGAAGGTGAAGAGGAGTATTTCTTCATAATGAAGAAAGGGCAAGTCCCTGAGATCTTTGACAAGCAAGGGCGTAAGTGCATGGTTCAATCGCAAGATGCGCCTATGACTTATCTGAGTGAAGTCACCAATCCTAGAGAGGATGTGCAATTTATGACGATTGCAGATGTGACATTCATGCTGAATCGTAAGAAGGTTGTCAAGGCCAGACCTGAACGTTCACCTCAAGTAGGTAATACTGCTATTGTCTTTATGGCTTATGGTCAGTATGGTACGCACTACAAGATTATCATTGATGGTGTAGTGGCTGCTGGGTATAAAACTAGGGATGGTGCCGAGGCACATCACATTGAAGACATCAGAACTGAAAGCATAGCTTATAACTTATACCAGTCACTCCAAAGCTGGGATAAGATTGCAGACTATGAAACTCAATTGGATGGTACTTCGATCTACATAACAAGACGTGATGGCTCTACTACCTTCGACATCACCACAGAAGATGGGGCAAAAGGTAAAGATTTGGTAGCCATCAAATACAAGGTGGCATCTACAGACCTATTACCTTCACGAGCACCGGAAGGCTACAAGGTGCAAGTCTGGCCTACAGGGAGCAAGCCTGAATCCAGATACTGGCTGCAAGCAGAAAAGCAGAACGGCAACATAGTGTCTTGGAAGGAAACATTAGCTGCCGATGTGCTTGTAGGTTTTGACAAGTCAACCATGCCGTACATTATAGAACGTACAGGTTTTGTTAATGGAGTGGCACAGTTTAAGATCAGACAAGGGGATTGGGAAGACCGTAAGGTTGGCGATGACCTGACCAACCCTATGCCATCTTTTATTGATGAAGAAGTACCTCAGACTATAGGCGGAATGTTCATGGTACAGAACCGACTATGTGTGACGGCAGGAGAGGCTGTGATTGCAACGCGCACTTCCTACTTCTTTGACTTCTTCCGATATACTGCTGTGTCTGCTGTAGCCACTGACCCTTTTGATGTATTCTCAGATGCAAGTGAGGTGTATCAGCTAAAACATGCCGTGACCTTAGACGGCTCCACTGTGCTGTTCGCAGATAAATCTCAGTTCATCCTTCCTGGAGATAAGCCTCTTGAGAAGTCAAACGTGCTGCTTAAACCTGTAACAACATTCGAGGTTAACAACAATGTTAGGCCTGTAGCTACAGGTGAGTCTGTAATGTTTGCCACGAGTGAAGGTGCATATTCTGGTGTGCGGGAGTTTTACACAGACTCTTATAGTGATACCAAGAAGGCCCAAGCTATAACTAGTCACGTCAATAAGCTGATAGAGGGCAACATTATCATGATGTCAGCCAGCACTAATGTGAACAGATTGCTTGTCTTGACCGACAAGTACAGGCACATTATCTACTGCTATGATTGGCTGTGGCAAGGAACTGAGCGTGTACAAGCTGCATGGCATAAATGGGAGTGGCCTTTGGGTACATTCATCCGTGGTATGTTCTACTCAGGTGAACACCTATATTTGCTCATCGAAAGAGGAAGCACTGGTGTGTACCTTGAGCGCATGGATATGGGAGATGCACTTGTATATAATCTGAATGACCGCATCCGTATGGACAGGCAGGCTGAACTTATCTTTAGGCATATCAAGGCTGAAGATGTATGGGTATCTGAGCCGCTGCCTTGGCAACCAACTGATGTGGACTTGCTTGACTGTGTACTGATAGATGGGTGGGATTCTTACATCGGTGGCTCTTTCTTGTTTAGTTATAATTCAGGAAACAACACACTAACTACAACCTTTGACATGCACGACGACAATCATGTGAAAGCCAAGGTGGTTGTTGGTCAATTGTACCCACAGGAGTTTGAGCCTACACAGGTTGTCATACGTGATAATCAAGAGCGAGTCTCTTACATAGATGTACCAACGGTTGGATTGGTTCACCTTAATCTAGATAAGTATCCTGACTTCAAGGTGGAAGTCAAGAATCTGAAGAGTGGCAAAGTGCGAAATGTGTTGGCCTCTAACAGGATAGGTGGTGCCAGAAACAATATTGTTGGTTATGTAGAGCCAAGAGAGGGTGTGTTCAAATTCCCATTAAGGTCTCTTAGCACCGACACAGTGTACCGTGTGATGGTAGAATCACCTCATACCTTCCAGCTTAGAGATATTGAGTGGGAAGGTTCGTACAACCCTACTAAGAGGAGAGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
840b0a0b4d0581a9823473b5ffd2e74e4fbefeef18828487735faca2f4ad65f6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3100
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K30 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank