Protein

Genbank accession
ABQ12464.1 [GenBank]
Protein name
putative variable tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MPTSNKIVTVSGTGYTVDVTVCNLDADLTLKDFVVLHDGVLVSNANYTKTTRTILTYTGTALPSTTVEVRRRTPTNYILGARYGSRIRSDDWNKELDRITRRAEEYELNGVGAGSITGSQAPQNDPFGASWASDIVYPPTRQAVYSWGVNLVNATQLSSTLSSYVTNTALSTLLTNYALSASPSFTGNPTVPTQLTTDSSTRIANTAFVQNLIAGLNLPTTYAPLSSPTFTGTPSAPTPAAGNSTTRLATTAFVSQSQRPFVDATRNTTPQALAHNTYTTLVWNNEIRDSDGAYNSTTGAFTVPAGLGGYYEFTGAVLLSAGCSNLLVEIYVNGIPARRIGQSQGGSDVLFGTPFTGSVLLGAGDVVTLRCYQFNSSSASRDTLVTSSAFNWVTIKRLNV
Physico‐chemical
properties
protein length:400 AA
molecular weight: 42552,81260 Da
isoelectric point:7,65737
aromaticity:0,08750
hydropathy:-0,10775

Domains

Domains [InterPro]
Coil
89–109
Coil IPR001073
IPR008983
254–396
IPR008983
IPR008983
274–396
IPR008983
ABQ12464.1
1 400
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Phormidium phage Pf-WMP3
[NCBI] 		2914005 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABQ12464.1 [NCBI]
Genbank nucleotide accession
EF537008 [NCBI]
CDS location
range 16425 -> 17627
strand -
CDS
ATGCCAACGAGTAACAAGATAGTTACCGTCAGTGGTACAGGTTACACAGTAGACGTGACAGTGTGTAACCTAGACGCTGACTTAACACTAAAAGACTTTGTAGTACTTCATGACGGAGTACTCGTAAGTAACGCTAACTATACTAAGACGACTAGAACCATCTTGACCTATACGGGTACAGCGTTACCTTCTACGACTGTAGAAGTTAGACGAAGAACACCAACCAACTATATCCTTGGTGCAAGATATGGTAGTCGTATCCGTAGTGATGACTGGAACAAAGAGCTAGACCGTATCACTAGACGTGCTGAAGAGTACGAGCTTAACGGTGTAGGGGCTGGTAGTATCACTGGTAGCCAAGCACCACAGAACGACCCCTTTGGTGCGTCATGGGCTAGTGATATCGTTTACCCTCCGACAAGACAAGCTGTGTACAGTTGGGGTGTGAACCTCGTTAACGCAACACAGTTATCTTCTACGTTGTCGTCATACGTGACAAACACAGCACTGTCTACGCTGTTAACTAACTATGCGTTATCTGCTTCCCCTTCCTTTACGGGGAACCCAACAGTACCTACACAGTTAACGACAGACAGTAGTACACGTATCGCTAACACAGCGTTTGTTCAGAACCTTATCGCAGGGTTAAACTTACCGACAACGTATGCACCACTGTCTAGCCCTACGTTCACAGGTACACCATCTGCACCTACACCTGCTGCTGGTAACTCTACAACTAGGTTAGCTACTACAGCCTTTGTGTCTCAAAGCCAAAGACCGTTTGTAGACGCTACACGTAACACGACACCACAGGCGCTTGCTCATAACACATACACTACGCTTGTATGGAACAACGAGATCAGGGACTCTGACGGTGCGTATAACTCGACTACAGGTGCGTTTACTGTACCTGCTGGTTTGGGTGGTTACTATGAGTTCACTGGTGCTGTGTTGTTAAGTGCTGGCTGTAGCAACCTTCTCGTAGAGATCTATGTGAACGGTATACCAGCTAGACGTATAGGACAAAGCCAAGGAGGTAGTGATGTCTTGTTCGGTACACCCTTCACTGGTAGTGTGTTGCTAGGTGCTGGTGATGTGGTGACACTGAGATGCTACCAGTTCAACAGTTCATCAGCGTCTCGTGATACGTTAGTCACAAGCAGTGCGTTTAACTGGGTGACTATCAAACGCCTGAACGTATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4edb08535e8ae58f0400a0e3ba3fe7ffe63ca4fa66e7bb0e57d8df4db97cf410
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8141
Evidence 0,8141
Download PDB

Literature

Title Authors Date PMID Source
Genomic analysis of freshwater cyanophage Pf-WMP3 Infecting cyanobacterium Phormidium foveolarum: the conserved elements for a phage Liu,X., Kong,S., Shi,M., Fu,L., Gao,Y. and An,C. 2008 18443848 GenBank