Protein

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Genbank accession
XVB95008.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,64
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MEYVVANIPDGVPVRIYRGEIGEDTEVTEDFEALKEDDVFHIIEGTGGGGGFLGKLLDPLGVLKFVTKLISPSQKTPKTSLANQQAESPNNSLTDRNNKPRPYERSYDICGRVQTIPNDLMTTYKIFDESGRIIEYGYYDAGRGYLDIKAEDITDGDTKVQEITGTSVAVYAPFTSPNNTNTPQLLVGEPINQNLYITIASNEVDGAVLKAQNDIRVNPSDTGRVRYDSATKIGYLYDDTGDSGFAEILSVGDTASFNNFDVPHVTNTNGNFRVLYVDNFELRVDTGGASNWAALGSTTYSLSQRSDTWVGPVDTYERTLTDWTTLNRLEVERVVANIAAANGMYKDNGSKLRTSVTVELQYQLLDETGAPYGGIYSKQAVISGRSADYTGVTIYADLPVRSKVRVRARRVTNLDLDFEGTVVDEVSYINLYGQVRDTTPHYGNRTTVHSARKQTPRAAEIKQPQLRMVATEMVYKYLGNGVFDTVMTPNTQAIQSLIRLARDPVVGNLNLTTSNMDKLLATQTEIENYFGNAEAGQFCYTFDDYKTTMQDIISTIADAIFCTPYRKGQDILLDFERPRMGPEMVFTHRSKTTASEKWTRTFNDAQVYDSLKFSYIGPDTNVKETISIPAEGGVNTETYDSKGIRNYRQAYWAAYRRYQKNLLKKVTVSFTATEEGVFVLPGRAISVVKGSRVAPQDGYVVAVNGLTLTLSQPVTFIPGDDHSLILKKRDGGVQSVAVVPGSNDREVIMLSAPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGVNYEADFYKYDGVAPFGSGFSDGFSNGFS
Physico‐chemical
properties
protein length:827 AA
molecular weight: 91322,73800 Da
isoelectric point:4,99896
aromaticity:0,09674
hydropathy:-0,39141

Domains

Domains [InterPro]
DC_0118
STR
1–661
DC_0118 DC_0808
NF040662
Unmapped
330–807
NF040662
XVB95008.1
1 827
Architecture
STR
RBD
STR 1-661 | RBD 679-823 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XVB95008.1
1 827
Domain Start End Length (AA) Confidence
N-terminal 1 209 209 0,9878
Central domain 210 408 200 0,6550
C-terminal 409 827 418 0,1046
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-209
Central
210-408
C-terminal
409-827

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Eco_Hrm2
[NCBI] 		3425916 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB95008.1 [NCBI]
Genbank nucleotide accession
PV656002 [NCBI]
CDS location
range 24226 -> 26709
strand +
CDS
ATGGAATACGTCGTTGCTAACATCCCAGACGGGGTGCCTGTACGTATTTACCGGGGCGAGATTGGTGAGGATACAGAAGTAACTGAAGATTTCGAAGCTCTGAAAGAAGACGATGTTTTCCATATTATCGAAGGCACTGGTGGTGGTGGCGGTTTTCTGGGTAAACTCCTGGACCCTTTGGGCGTGCTTAAATTTGTGACCAAGTTGATTTCTCCGTCACAGAAAACGCCTAAAACGAGTTTGGCGAACCAGCAGGCCGAGTCGCCAAACAACAGCCTGACGGACAGAAACAATAAACCCCGTCCATATGAACGGTCGTATGATATTTGCGGCAGGGTCCAGACTATCCCTAATGACCTCATGACTACCTATAAAATATTCGATGAATCTGGTCGCATTATTGAATACGGATACTACGATGCCGGTCGTGGGTATCTGGACATCAAGGCCGAAGATATTACCGACGGCGATACTAAGGTACAGGAGATTACGGGGACTTCTGTCGCGGTGTACGCGCCGTTTACATCCCCCAACAATACAAATACCCCGCAGCTTCTGGTGGGGGAACCTATCAATCAGAATCTTTATATAACTATCGCTTCTAATGAAGTAGACGGTGCTGTTCTTAAAGCGCAGAACGATATCAGGGTTAACCCTAGCGACACGGGCCGCGTGAGATACGACTCTGCTACAAAAATTGGATACCTGTACGACGATACCGGTGATTCTGGTTTTGCCGAAATATTATCGGTAGGGGACACCGCGTCGTTCAATAACTTCGACGTTCCACACGTGACAAACACCAACGGCAACTTCCGCGTTCTTTATGTTGATAACTTCGAACTACGAGTTGACACCGGCGGCGCGTCTAACTGGGCGGCTTTAGGTTCAACCACATATTCACTTTCCCAGAGAAGTGACACGTGGGTAGGACCCGTTGATACGTATGAAAGAACATTAACCGACTGGACCACCTTAAACCGTCTGGAAGTTGAACGGGTAGTTGCTAACATTGCCGCCGCGAATGGTATGTACAAGGACAACGGCAGTAAATTGCGTACATCGGTAACTGTCGAGCTTCAGTATCAACTACTCGATGAAACCGGGGCCCCGTATGGGGGTATTTACTCGAAACAGGCCGTTATATCCGGGCGTTCCGCCGATTACACCGGTGTTACCATTTACGCTGACTTGCCCGTGCGGTCGAAAGTCAGGGTACGTGCCCGCCGCGTTACTAACCTGGACCTTGATTTTGAGGGGACCGTGGTGGACGAGGTTTCCTACATCAACCTTTACGGGCAGGTCCGCGACACTACGCCGCATTACGGCAATCGTACTACCGTACACTCCGCGCGTAAGCAGACGCCGCGCGCGGCGGAGATTAAGCAACCACAGTTACGTATGGTCGCCACAGAGATGGTGTACAAATACCTCGGTAATGGTGTATTCGACACCGTAATGACACCGAATACTCAGGCGATTCAGTCCTTAATCCGTCTTGCCCGCGACCCGGTAGTAGGTAATCTCAACCTAACAACATCCAATATGGACAAGTTGTTAGCGACTCAGACCGAGATTGAGAATTATTTCGGAAATGCTGAGGCAGGGCAATTCTGCTACACGTTCGATGATTACAAAACGACTATGCAGGACATAATCAGCACCATAGCCGACGCTATTTTCTGTACGCCGTATCGTAAAGGGCAGGACATATTACTGGATTTCGAGCGCCCTCGCATGGGACCGGAGATGGTGTTCACGCATCGCAGCAAAACTACAGCCTCTGAAAAGTGGACGCGCACATTTAACGACGCTCAGGTATACGATAGCCTTAAGTTTTCTTACATTGGCCCCGATACCAACGTAAAGGAGACTATCAGCATACCAGCAGAAGGAGGGGTTAATACTGAAACGTATGACTCTAAGGGTATCCGTAACTATCGACAGGCATATTGGGCTGCGTACCGCCGGTACCAGAAGAACCTGTTGAAGAAGGTGACGGTATCATTCACGGCAACAGAAGAAGGTGTTTTTGTGTTACCAGGGCGTGCAATAAGCGTGGTTAAAGGTTCTCGCGTAGCACCTCAAGATGGCTATGTTGTTGCCGTTAATGGGCTTACCCTGACGTTATCACAACCGGTTACTTTTATCCCCGGAGACGACCACTCATTGATTCTCAAGAAGCGCGACGGCGGTGTTCAGAGCGTTGCAGTGGTTCCGGGAAGTAACGACCGTGAAGTGATTATGCTCTCCGCACCGCAGGAGGCAATTTACACAGGGAATAGCGCACTAAAAACTGAGTTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACAGTTGACCCCGGGGATGACAGAACAGTTAAGATTACCGGGGTTAACTACGAAGCGGATTTCTATAAATACGACGGCGTCGCGCCTTTCGGCAGCGGTTTCTCCGACGGATTCAGCAACGGTTTTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
27400dbcdc1fe05b434239c1ead1b0c4538f89285180e5c41a5c8bce9a356d70
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8474
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50