Protein

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Genbank accession
AYP29222.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQQTEAEGRLNLYDDVTPLEKTKNINVLTAAIRKKTRGADVREAIATSIETTYADSIANGNTNMEVAKARGTYNTLGDRLENFDTEIRNIVSCSPKGIYPNLSALQSAKPNGDSGIYLTTDNGHWYYYANGWKDGGLYQAAGIADGSVKFSSIDKKDFNVQFDPKLKVVYKPNLNSWMNADNPTENATKIYMIPFRGAGKVTVSFYGSLFPGVKSQIKLVKKATNSSNYCVSLNEKTITETTEGGYTTITFHHPVPKGEYFIAFCGINFRWNFGYSYWLESSSGYNQSIFLQRKTENRCIDAVIACDFSVDSSGEKLLDENMHFDSGIFSFHTEPILYIPNYELPIGTKSIILGTKNNTPVFIFRKNENNTFEKIKQIYTEEIGEGARYRKYFLDIVAEKDMYVGVFGNVYYDTAGDVSAKKGHFEKDISASDSENIGSMYFNPHTNIHMVPILYYDENLINVAQKNANSFEEINGSLIDITNKINKKTITLANIIRKMKRGNAVTISLYGDSTYYGHKSGAVPLGTRTSEPVSESLQKYLRAYFLNENITVNNYATNGRQAQQDSDDWDTKMANDKADVIFINFGINDSNSGKTAETFYSQMETLVQGALKTNKAVILETANQVLTFDKGSQGMGDYTKAFNIKEFVDVTRQLVKSYNIYLLDGYKRSLSYINEFFDPTIALPDGMHPSDDMYKYKAVQMMSMFTNTSFSKLKSGQTLSILEANFNTTTPNSVADSSSKFGFKYTVKDISVSFGLEKQSDIKIYIKSTASMKVYVNGLDTQYISSDGYIVIKNIHSNDVFIQITSDEATDVYGLEVV
Physico‐chemical
properties
protein length:818 AA
molecular weight: 91681,86310 Da
isoelectric point:5,90645
aromaticity:0,11736
hydropathy:-0,40660

Domains

Domains [InterPro]
DC_0719
STR
1–795
DC_0719
IPR051532
Unmapped
460–694
IPR051532
SSF52266
STR
505–704
SSF52266
IPR036514
STR
505–716
IPR036514
cd00229
ENZ
507–703
cd00229
IPR013830
ENZ
510–695
IPR013830
AYP29222.1
1 818
Architecture
STR
STR 1-795 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYP29222.1
1 818
Domain Start End Length (AA) Confidence
N-terminal 1 157 157 0,9894
Central domain 158 380 224 0,6103
C-terminal 381 818 437 0,3678
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-157
Central
158-380
C-terminal
381-818

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage SW4
[NCBI] 		2419654 No lineage information
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYP29222.1 [NCBI]
Genbank nucleotide accession
MH892355.1 [NCBI]
CDS location
range 16154 -> 18610
strand +
CDS
ATGCAACAAACAGAAGCAGAGGGACGTTTGAACCTCTACGATGATGTGACGCCGTTGGAAAAAACCAAAAACATTAATGTTTTGACAGCGGCTATCAGAAAAAAAACAAGAGGGGCAGATGTCCGTGAAGCCATCGCTACGTCTATTGAAACGACTTACGCAGATAGTATCGCTAACGGAAATACCAACATGGAAGTCGCTAAGGCAAGAGGAACATATAATACTCTAGGAGATAGACTTGAAAATTTTGATACTGAAATCAGGAATATTGTAAGTTGTTCACCAAAAGGAATATATCCTAATCTATCAGCGCTACAATCGGCTAAGCCGAACGGAGATTCCGGAATCTATCTCACAACAGACAACGGCCATTGGTACTATTATGCTAACGGTTGGAAAGATGGTGGCCTGTATCAGGCGGCGGGGATTGCTGATGGAAGCGTGAAGTTTTCTTCAATCGATAAAAAAGATTTTAACGTTCAGTTTGACCCGAAATTGAAAGTCGTATATAAGCCAAATTTAAATTCTTGGATGAATGCAGATAATCCCACCGAGAACGCCACAAAAATTTATATGATTCCATTTAGAGGCGCAGGCAAAGTGACCGTTAGTTTTTATGGATCCCTGTTTCCTGGCGTAAAATCGCAAATAAAGTTAGTCAAAAAGGCTACTAATTCAAGTAATTATTGTGTGTCTCTCAATGAAAAAACCATAACTGAAACGACAGAAGGCGGATATACAACAATTACGTTCCATCATCCAGTTCCTAAAGGCGAATATTTTATCGCTTTTTGTGGAATTAATTTCAGATGGAATTTTGGATATAGTTATTGGTTAGAAAGCTCTTCAGGTTACAATCAGTCGATTTTTTTACAAAGAAAGACAGAAAATAGATGCATAGATGCTGTTATTGCTTGTGATTTTTCTGTTGATTCTAGCGGTGAGAAATTATTAGACGAAAATATGCACTTTGATTCAGGTATATTTTCGTTTCACACTGAACCTATTTTATATATTCCTAATTACGAATTGCCTATCGGAACAAAATCTATAATTCTTGGGACTAAAAACAATACACCTGTTTTCATTTTTAGAAAAAATGAAAATAATACGTTTGAAAAAATAAAACAAATATACACAGAAGAAATAGGTGAAGGAGCACGTTATAGAAAATACTTTTTAGACATTGTTGCTGAAAAAGATATGTATGTCGGAGTTTTTGGAAATGTTTATTATGATACTGCTGGTGATGTTTCTGCAAAGAAAGGACATTTCGAAAAAGATATTTCGGCTTCAGATTCTGAAAATATAGGGTCAATGTATTTCAATCCACATACAAATATTCACATGGTTCCTATTTTATATTATGATGAAAATTTAATTAATGTTGCACAAAAAAATGCGAATTCATTTGAGGAAATAAATGGATCGCTAATTGATATCACCAATAAAATAAATAAAAAAACAATAACATTAGCAAACATAATCAGAAAAATGAAAAGAGGGAATGCAGTCACTATTTCGCTTTACGGAGACTCAACGTACTATGGTCATAAGTCAGGCGCTGTCCCTTTAGGCACTAGAACAAGCGAGCCTGTTTCTGAAAGTTTGCAAAAATATCTACGTGCTTATTTTTTGAACGAAAATATAACAGTAAACAACTATGCAACTAACGGAAGACAAGCACAACAAGATTCAGATGATTGGGACACAAAAATGGCTAATGACAAAGCGGACGTTATTTTTATAAATTTCGGGATAAACGATTCAAATTCCGGTAAAACAGCAGAAACTTTTTACAGTCAAATGGAAACTTTAGTACAAGGTGCGCTGAAAACGAACAAAGCAGTCATCTTAGAAACTGCTAATCAAGTCTTAACTTTTGACAAAGGAAGTCAAGGGATGGGAGACTATACGAAAGCTTTTAACATTAAAGAATTTGTTGATGTAACAAGACAGTTAGTTAAGAGTTATAATATTTATTTGCTTGATGGATATAAACGTTCATTAAGCTACATTAACGAATTTTTTGATCCCACAATAGCTTTGCCGGACGGCATGCATCCGTCAGACGATATGTATAAGTATAAAGCTGTTCAAATGATGTCTATGTTTACTAATACGAGTTTTTCAAAATTAAAATCAGGACAGACATTATCTATTTTAGAAGCTAATTTTAATACAACAACACCAAATTCAGTAGCGGATAGCAGTTCTAAATTCGGTTTTAAATATACGGTTAAAGACATCTCGGTATCATTTGGACTAGAAAAACAATCAGATATTAAAATTTATATCAAAAGCACAGCATCAATGAAAGTTTATGTTAATGGTTTAGATACTCAATATATTAGCTCTGATGGATATATCGTAATAAAAAATATTCACTCTAACGATGTATTCATTCAGATCACTTCAGACGAAGCGACAGATGTTTATGGTTTAGAAGTGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f32c2a085ee80e9fe157dc17bb4dea46074a3d07f7dced93d0ffc2a482d1cff9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7104
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biodiversity of Streptococcus thermophilus Phages in Global Dairy Fermentations Lavelle,K., Martinez,I., Neve,H., Lugli,G., Franz,C., Ventura,M., Bello,F., Sinderen,D. and Mahony,J. 2018 — GenBank