Protein

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Genbank accession
UZV39862.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MPTHIYQRPLMDQGSWATTLRVVGQLNDYNLGEPYEGRLQIINSIGPRTVKQTGGDRLPDGTVITIDEETAEVVVTWEPLFKIPGSVTEYKAELRNWNFEDTKGWTFGTGWNVTTDNPITGSKSAVYAKNNGQSIMSHTSRYRVIPGRKITAMCKVRQGATAAGNAGASVMLEWRDEEGNIVSRSEGNRVMSASKNRVYPSKVEAFPPANAVFVNIACNGIRWKENKDLWADNFEWDHVIIDVVEPVNPSEEYYLELEVTDTTGRVGRWSGSIQLAGVYTTSKLYGFYELDELFYGASFNGYRIQEMEMPRDNIAYGGVFASLQVKSIRTDYAHDSDDFLTYGGVFAGISVRAIRKDYAHVHDPQDDISYSPKFVSLLVKQHPRVTQPLEDMLTCSPSFVSLEFGS
Physico‐chemical
properties
protein length:406 AA
molecular weight: 45496,44840 Da
isoelectric point:5,25160
aromaticity:0,10837
hydropathy:-0,40172

Domains

Domains [InterPro]
DC_0281
ATT
1–90
DC_0281 G3DSA:2.60.120.260 DC_0398
G3DSA:2.60.120.260
STR
93–237
G3DSA:2.60.120.260
UZV39862.1
1 406
Architecture
ATT
STR
RBD
ATT 1-90 | STR 91-237 | RBD 238-405 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UZV39862.1
1 406
Domain Start End Length (AA) Confidence
N-terminal 1 188 188 0,4808
Central domain 189 395 208 0,1095
C-terminal 396 406 10 0,1726
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-188
Central
189-395
C-terminal
396-406

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas virus PB119
[NCBI] 		2995629 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas euvesicatoria
[NCBI] 		456327 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UZV39862.1 [NCBI]
Genbank nucleotide accession
OP562166.1 [NCBI]
CDS location
range 68327 -> 69547
strand -
CDS
ATGCCAACCCATATCTATCAACGACCGTTGATGGATCAGGGCAGCTGGGCTACGACTCTCCGGGTTGTTGGTCAATTGAACGACTACAACCTTGGGGAGCCGTACGAAGGTCGGCTCCAGATCATCAACAGCATCGGTCCACGAACCGTGAAGCAGACCGGTGGTGATCGCTTGCCTGATGGCACGGTGATCACTATCGATGAGGAAACAGCTGAGGTTGTCGTCACGTGGGAACCTCTGTTCAAGATCCCCGGATCGGTGACCGAGTACAAGGCTGAGCTTCGGAACTGGAACTTCGAAGACACCAAGGGTTGGACCTTCGGTACTGGCTGGAATGTCACGACCGATAATCCCATCACTGGTTCGAAGTCTGCTGTCTACGCCAAGAACAATGGTCAGTCGATCATGAGCCACACGTCTCGCTATCGGGTTATCCCCGGTCGCAAGATCACGGCTATGTGCAAGGTGCGACAGGGTGCAACGGCAGCTGGTAATGCTGGTGCATCCGTCATGCTGGAATGGCGAGATGAGGAAGGCAATATCGTTTCTCGCTCTGAAGGCAACCGTGTGATGTCGGCAAGCAAGAACCGTGTCTACCCTTCAAAGGTAGAAGCGTTTCCTCCGGCAAATGCGGTCTTCGTCAACATTGCCTGCAACGGTATTCGTTGGAAAGAGAACAAGGATCTCTGGGCTGACAACTTTGAGTGGGATCACGTCATCATCGATGTGGTCGAACCAGTCAATCCCAGCGAAGAGTATTACCTTGAACTCGAAGTGACGGACACCACTGGTCGTGTTGGTCGTTGGTCTGGTTCGATCCAGTTGGCTGGTGTCTATACGACCAGTAAACTGTATGGATTTTACGAGCTGGATGAACTCTTCTATGGAGCATCGTTCAACGGCTATCGCATCCAAGAGATGGAGATGCCGCGAGACAATATCGCCTATGGTGGTGTATTTGCATCGTTGCAAGTCAAGAGCATCCGTACAGACTACGCCCATGATTCGGATGACTTCCTGACTTATGGTGGTGTCTTTGCAGGCATTTCTGTTCGTGCGATCCGAAAGGATTATGCACATGTACATGATCCCCAAGACGACATCTCTTACAGTCCGAAGTTCGTCTCTCTTCTGGTCAAGCAGCATCCGCGAGTTACCCAACCTCTCGAAGATATGTTGACCTGTTCCCCCTCGTTTGTTTCCTTGGAGTTCGGTTCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c950117aa50d03b10d34cd23d8604030ae736e0bd1e2e3a60e410909d445f00f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6626
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel bacteriophages useful for control of diseases caused by X. euvesicatoria Petrzik,K. and Brazdova,S. 2015-04-10 — GenBank