Protein

View in Explore
Genbank accession
QJB22091.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MASPDLIIRPFAESGEKQAPPQSDPNGFVNFSQGYTEDYEVDLNSGLTTAKAVERDIQNYLFHLLTGAVQAWQQMSISPWYAEMPGGYSAGAVVGRPNSSGAWQIWRSTADNNVADPIASGQTSWEYVPFNSEIVKSVAMPAGGTALIVPGGTRTEVVTVAADFNSFINGTWEFQTDTIANSSANSPVQLGVASALAGMLESKRWLNGATSYTVQRYVDRSGNSFYRGATNAVWTKWTSITQVNNFSVDTSAVANLVQGNALLSSLTLSNNQSFWVQIANANTDATNFSPNPSIAPRPVVSLTGAPLSGIELVSGGRALFTYNKPSDLWNLITCTLAPASVSPAKKVAQIPNVNQLIDMSTDTSSVANIVRGAGQLYGNPPAPVDGQKWTIRVATSNTGAVTISPNPAAPLRELVGANNTPLQGGELIVGNEIVVMYRESGTRYILLENQGGARQIAPATNTNQAMNLGQANGRLINVIPFPVSGTYTKTSDLVRNIRVRLWAGGGATGGGTASTSTGCGGASGGGYCEGYFSAPAGPTAVVVGMGGLAANGAAKGGDGGASSFGSLLSATGGAGAQYNVGNGPPGNGFGGYLQVLGGQGRGVLIPAAGGVAIGGMGGGAHCSSSAPIGTGGGERGMFPGGGASGAIGPNTGGNGGNGTCIVEEFS
Physico‐chemical
properties
protein length:666 AA
molecular weight: 67841,63820 Da
isoelectric point:5,32629
aromaticity:0,07508
hydropathy:-0,07162

Domains

Domains [InterPro]
DC_1737
ATT
22–125
DC_1737 cd19958
DC_1053
STR
239–666
DC_1053
QJB22091.1
1 666
Architecture
ATT
STR
ATT 22-125 | STR 159-666
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage FoX6
[NCBI] 		2723902 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris
[NCBI] 		340 Bacteria > Proteobacteria > Gammaproteobacteria > Xanthomonadales > Xanthomonadaceae > Xanthomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJB22091.1 [NCBI]
Genbank nucleotide accession
MT161386 [NCBI]
CDS location
range 25066 -> 27066
strand +
CDS
ATGGCATCACCAGACCTTATTATCAGGCCTTTCGCTGAGAGTGGTGAGAAACAGGCGCCGCCGCAGAGTGATCCAAATGGGTTTGTAAACTTCAGCCAAGGTTACACTGAAGATTATGAAGTGGATTTGAACTCTGGATTGACGACTGCCAAGGCCGTTGAGCGTGATATTCAGAACTATCTGTTTCACCTTCTGACTGGGGCTGTGCAGGCGTGGCAGCAGATGTCGATATCCCCTTGGTATGCAGAAATGCCAGGCGGGTATAGTGCCGGTGCCGTCGTTGGGCGCCCTAACTCTTCGGGGGCTTGGCAGATTTGGCGCTCTACGGCAGACAATAACGTTGCAGACCCAATCGCAAGCGGCCAGACTTCATGGGAATACGTACCATTCAACTCTGAGATTGTTAAGTCCGTTGCGATGCCTGCTGGTGGTACTGCCCTTATCGTTCCAGGCGGCACCAGAACTGAGGTTGTAACTGTTGCCGCAGATTTTAATTCATTTATTAATGGAACTTGGGAGTTTCAGACTGACACCATTGCCAACTCAAGCGCCAATTCTCCAGTGCAGCTGGGCGTTGCAAGCGCACTTGCTGGAATGCTTGAGTCAAAAAGGTGGTTGAATGGCGCCACTTCTTACACGGTCCAGCGTTATGTTGACCGCAGCGGCAATTCGTTTTACCGAGGCGCAACGAATGCGGTCTGGACCAAGTGGACAAGCATCACCCAAGTTAACAATTTCAGCGTTGATACTTCAGCAGTTGCCAATTTGGTCCAAGGTAACGCTTTACTATCGTCTCTTACCCTATCTAACAACCAATCTTTTTGGGTTCAGATCGCAAACGCAAACACAGATGCAACCAACTTTTCACCAAATCCATCGATAGCTCCTAGGCCTGTTGTTTCGCTAACAGGCGCACCGCTGTCGGGGATTGAATTGGTATCTGGTGGGCGCGCGCTTTTCACCTATAACAAGCCCAGTGATCTTTGGAATCTGATCACCTGCACGCTCGCACCGGCCTCAGTATCCCCTGCAAAAAAAGTCGCGCAAATTCCAAACGTAAACCAGCTGATTGATATGTCAACTGACACATCTTCAGTTGCAAACATCGTGCGCGGCGCTGGTCAGTTGTATGGAAACCCGCCAGCGCCTGTTGATGGCCAGAAATGGACAATCCGTGTCGCAACGTCCAATACAGGTGCCGTAACCATATCACCAAACCCTGCCGCGCCACTGAGAGAACTTGTAGGCGCAAACAACACGCCACTGCAAGGCGGCGAGCTGATCGTTGGCAATGAAATTGTGGTGATGTATCGTGAATCTGGAACGCGCTACATCCTTCTGGAAAACCAAGGTGGTGCAAGGCAGATTGCGCCAGCGACAAACACAAACCAGGCTATGAACTTGGGTCAGGCTAATGGGCGCCTGATCAACGTAATACCATTCCCGGTTAGCGGAACTTACACAAAGACATCCGATTTAGTCAGGAACATCAGAGTGCGTCTTTGGGCTGGCGGAGGGGCTACTGGTGGCGGAACTGCATCAACATCAACTGGATGCGGCGGCGCTTCTGGCGGCGGCTACTGTGAAGGGTATTTTTCAGCGCCAGCAGGACCAACGGCGGTTGTAGTTGGTATGGGCGGGCTTGCTGCAAATGGTGCGGCAAAAGGCGGCGATGGCGGGGCCAGTTCATTTGGCAGTCTGCTAAGCGCGACAGGTGGGGCGGGCGCCCAATATAATGTCGGGAACGGGCCTCCTGGGAACGGATTTGGTGGATATCTCCAGGTTCTTGGCGGGCAAGGGCGTGGCGTTCTGATCCCGGCCGCAGGAGGGGTTGCGATTGGCGGGATGGGCGGCGGCGCCCACTGCTCATCCAGCGCGCCAATCGGAACTGGCGGCGGAGAGAGGGGTATGTTCCCAGGCGGTGGCGCAAGCGGAGCGATTGGGCCGAATACAGGTGGAAATGGTGGAAATGGAACTTGTATCGTTGAGGAGTTTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a39b25b22fabb04be7a21571c30dc4148ace8bdaef2d6dd14f6dcd3b03d036dc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8050
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of an integrated pest management strategy to control Xanthomonas campestris pv. campestris by using bacteriophages Fortuna,K.J., Holtappels,D., Lavigne,R. and Wagemans,J. 2022-01-27 — GenBank