Protein

View in Explore
Genbank accession
QYN80696.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MATLKPIQFKRSKTAGSRPLPEQVLEGELALNLEDRMIFTKDDEGNIIDLGFAKGGRVDGDIVQVGNYTQTGDYTTSGDINAKTITASAGVVSNGDLKASTGVIRTRGGNSRNAHLWFEGEEVGLTNNYERGVMYALPQTATEGTINLRVMNGFDNSKAQSLFSFRGNGDFSAPRDLVSQRGRFSIEAVAPTINTTRIYTRDKPWRSNSDESYGWLDLVNYVPGENGALALNYVYKGRAMSGGTIWHQLVDERTGPEWALYTGSGPENKAFAVGSSAGKGLGNFTGSLHVGNPGYSAIGNNSITIGETNTGLRQTSAGNLDFLSANNMAFRFSAGEAINRSYNRLHVQHSDANGNAVNPPANNAQLQVNTSGDENNAGGNGLTLIGYYAGATGEYNHYFRGKGSASFDMQRGININQGGLNVYNGLTNVGQINLTGSMNTTNVPQGTYKWDDLNTVAADAKSYLRRFRSRNNSTIWHETVEGGIWRLSTGSTDAQEELQISTSGMFRVRGEVVALGNGGASGTGNHFRAVYGNYGFFIRNDGSNTYFMLTNSGDQYGTWNSFRPFTINNVSGRVSMANGVGISGGLTVAPGIESEYVKTYTGSIGHGSWASQNDNEAMIFQRITSASTSEYCPILKQKYIGGNRTWSIGTLISTGSFHIHMKDSAGNDRNFAFQPNGDFNGANTINASAISVGSARLSSIATPGGGQFANDGNVYINKSGFAGWIDALFVKKNGDTMSSTLNINANGPGINMNCPTGGSTYVIGRRNGVNGFYVGMGGTGNDATFHSYLNNTTINLRASDIQFSRTVYGNGDANFNNVYIRSDIRLKRNFKKIENALDKVDKLDGLIYEKKNTRESTEYETTEAGIIAQTLRSVLPEAVSEHEGTLNVSASGTIALLVNAIKELKARVEELESK
Physico‐chemical
properties
protein length:914 AA
molecular weight: 98323,31500 Da
isoelectric point:6,92210
aromaticity:0,09190
hydropathy:-0,44803

Domains

Domains [InterPro]
DC_0538
STR
1–725
DC_0538 G3DSA:6.20.80.10 IPR030392
IPR048390
ATT
499–567
IPR048390 DC_0971
IPR048388
ATT
759–811
IPR048388 IPR030392 Coil
QYN80696.1
1 914
Architecture
STR
ATT
STR
RBD
STR
ATT
RBD
STR 1-498 | ATT 499-567 | STR 568-725 | RBD 726-746 | STR 747-758 | ATT 759-811 | RBD 812-914
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYN80696.1
1 914
Domain Start End Length (AA) Confidence
N-terminal 1 74 74 0,7563
Central domain 75 283 210 0,3954
C-terminal 284 914 630 0,8359
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-74
Central
75-283
C-terminal
284-914

Taxonomy

  Name Taxonomy ID Lineage
Phage Kosakonia phage Kc304
[NCBI] 		2863196 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Kosakonia cowanii
[NCBI] 		208223 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYN80696.1 [NCBI]
Genbank nucleotide accession
MZ348424 [NCBI]
CDS location
range 157955 -> 160699
strand +
CDS
ATGGCAACTTTAAAACCAATACAATTTAAAAGAAGTAAAACAGCTGGTTCAAGACCTTTGCCTGAACAAGTATTAGAAGGTGAATTAGCCCTGAACCTCGAAGATCGTATGATTTTCACTAAAGATGATGAAGGGAATATCATTGACCTTGGTTTTGCAAAAGGTGGTCGTGTAGACGGCGATATTGTTCAGGTTGGTAATTACACTCAAACTGGGGATTACACTACTTCCGGGGACATCAATGCTAAAACTATAACAGCTTCAGCGGGTGTAGTTTCTAATGGCGATTTAAAAGCTTCTACTGGGGTTATTAGGACTAGAGGTGGTAATAGTAGGAACGCTCATCTTTGGTTTGAAGGTGAAGAAGTAGGCCTAACTAATAATTATGAAAGAGGCGTCATGTACGCTTTACCACAAACCGCTACTGAAGGGACTATTAACCTTAGGGTTATGAATGGTTTTGATAATAGCAAAGCCCAATCTTTATTTAGCTTCCGTGGTAACGGTGATTTTTCAGCTCCAAGAGATTTAGTATCTCAACGTGGGCGTTTTTCTATCGAAGCTGTGGCCCCTACAATTAACACAACTCGTATTTACACAAGAGATAAACCTTGGCGGTCAAATAGCGATGAATCTTATGGGTGGTTAGATTTAGTTAATTATGTTCCTGGAGAAAACGGGGCACTAGCATTAAACTATGTCTATAAAGGTCGAGCCATGTCTGGCGGAACCATTTGGCATCAATTGGTTGATGAAAGAACCGGTCCTGAATGGGCTCTTTATACTGGTAGCGGTCCTGAAAATAAAGCTTTTGCAGTAGGGTCATCCGCAGGTAAAGGTCTCGGTAACTTCACAGGCAGTTTACATGTAGGTAATCCAGGATATTCTGCTATTGGCAATAACTCTATTACTATTGGCGAAACTAATACTGGTTTAAGACAAACTTCAGCAGGTAATTTAGATTTCTTATCGGCTAATAATATGGCTTTCAGATTTTCTGCAGGTGAAGCCATAAACCGTTCTTATAATCGATTACACGTCCAGCATTCTGATGCTAATGGTAATGCTGTTAATCCACCAGCTAATAATGCTCAACTACAAGTAAATACTTCAGGTGATGAAAATAACGCAGGCGGAAACGGATTAACCTTAATAGGTTATTATGCTGGAGCTACAGGCGAATACAATCATTATTTCCGTGGTAAAGGTTCTGCATCTTTTGATATGCAACGTGGTATAAACATTAACCAAGGTGGCCTTAATGTTTATAATGGTTTAACGAATGTAGGCCAAATTAATTTAACAGGTTCAATGAATACTACTAACGTTCCACAAGGAACTTATAAATGGGACGATTTGAACACTGTAGCTGCTGATGCTAAATCTTATTTACGTAGATTCCGTTCAAGAAATAACTCAACGATTTGGCATGAAACAGTCGAAGGTGGAATTTGGCGTTTATCTACTGGTTCTACTGACGCTCAAGAAGAATTACAAATTAGTACTAGTGGTATGTTTAGGGTCAGAGGGGAAGTAGTTGCTCTTGGAAATGGTGGAGCCTCTGGGACTGGAAACCATTTCCGTGCCGTGTATGGGAATTACGGATTCTTTATTCGTAATGATGGTAGCAACACTTATTTTATGTTGACTAATTCAGGCGACCAATATGGTACATGGAATAGTTTCCGTCCTTTTACTATCAACAATGTGTCAGGACGTGTTTCAATGGCTAACGGCGTTGGTATTAGTGGCGGACTGACTGTTGCTCCAGGCATTGAATCGGAATATGTTAAAACTTATACAGGTAGTATAGGTCATGGCTCTTGGGCTTCACAGAATGATAATGAAGCAATGATTTTCCAAAGAATTACTAGTGCTTCTACTTCTGAATACTGTCCTATTCTTAAGCAAAAATATATTGGCGGAAATAGAACTTGGTCAATAGGTACTTTGATTAGCACAGGTTCTTTCCACATCCATATGAAAGATTCTGCTGGTAATGACAGAAACTTTGCTTTTCAACCTAACGGCGATTTTAATGGTGCTAATACCATTAATGCATCAGCTATATCTGTAGGCAGTGCTAGACTTAGTTCTATCGCTACTCCGGGTGGTGGTCAATTTGCTAATGACGGTAACGTTTATATCAATAAATCTGGTTTTGCAGGCTGGATAGATGCACTATTTGTTAAGAAAAATGGTGATACCATGTCTAGCACTTTAAACATAAACGCGAACGGCCCGGGCATAAATATGAACTGTCCTACAGGTGGTTCTACTTATGTTATAGGTAGGAGAAACGGTGTTAACGGATTTTATGTTGGTATGGGTGGTACTGGTAACGATGCAACGTTCCATAGTTATTTGAACAACACTACTATTAACTTACGTGCTTCAGATATCCAGTTCAGCCGTACAGTTTATGGTAATGGTGATGCAAACTTCAACAACGTTTATATTCGTTCAGATATTCGTTTAAAACGCAACTTCAAGAAAATTGAAAATGCTTTAGATAAAGTTGATAAACTTGATGGTTTAATTTACGAGAAGAAAAATACTCGTGAATCTACTGAATATGAAACAACTGAAGCAGGTATCATTGCCCAGACTTTACGATCTGTATTACCTGAAGCCGTTTCAGAGCATGAAGGTACTCTTAATGTTTCAGCTTCTGGGACTATTGCTCTGTTAGTTAATGCTATCAAAGAACTTAAAGCTCGTGTTGAAGAACTTGAATCAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4b10be53702628386eda5e812e87ce5c4d2c0f89242b7009a883e1afb2d68a98
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2982
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Viruses That Lyse Plant and Human Strains of Kosakonia cowanii Petrzik,K., Brazdova,S. and Krawczyk,K. 2021 — GenBank