Protein

View in Explore
Genbank accession
QIG68898.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MVDVKQRIDQLPTTLLPSLQHAFPAMKDGLTVQLKVQQIIDLLVNGAPTALDTWLELVAAIQSDESAIAAINTALGNRLRFDAAQALTALQKAQAITNLGASNLSPDFIQGMLLSNDGVNPNTHVNVLAGFCKGNNGSILLTNNATVTKRLDQNWAAGSGVGGLDTGTKANGATYFLYALQKASDGSFDWVFSTSATVVGVNTALLAGYTVVMCLGAVLTDASGNIRQFIMYPGDEYLWVTPVNDLVNAAIGTGGALGTIAVPSGVKVKANLRFMYQSASTTASALIHDPAQGSLSAGGGNAGGNAGSIQVASGYGVGADEIWTNTSRQVRYVAGASGTLNLWTDGFIFPCKRIG
Physico‐chemical
properties
protein length:355 AA
molecular weight: 36798,25310 Da
isoelectric point:5,56126
aromaticity:0,07042
hydropathy:0,18845

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y55
[NCBI] 		2509578 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG68898.1 [NCBI]
Genbank nucleotide accession
MN988500.1 [NCBI]
CDS location
range 31165 -> 32232
strand +
CDS
ATGGTTGACGTGAAACAACGGATTGACCAGCTCCCAACAACGCTTCTTCCTTCGCTGCAACACGCTTTCCCAGCGATGAAAGACGGCTTGACTGTTCAGCTCAAGGTCCAGCAGATTATCGATCTTCTGGTTAACGGCGCACCGACTGCTCTTGACACTTGGCTTGAACTGGTTGCCGCCATTCAAAGCGATGAAAGTGCGATTGCAGCAATCAATACCGCCCTCGGCAATCGCCTTCGCTTCGATGCCGCCCAGGCGTTGACCGCGTTGCAGAAAGCCCAGGCGATCACCAACCTTGGCGCCTCGAACCTTTCGCCGGACTTTATTCAGGGCATGCTCCTGAGCAACGATGGCGTTAACCCAAACACCCACGTCAACGTTCTTGCCGGCTTCTGCAAAGGCAATAACGGTAGCATCCTGCTGACCAACAACGCGACGGTGACCAAGCGCCTCGACCAGAACTGGGCGGCGGGGTCAGGTGTCGGCGGTCTCGATACTGGCACCAAGGCCAACGGCGCTACCTATTTTCTCTACGCCCTTCAAAAGGCGTCGGACGGATCGTTTGATTGGGTCTTCTCGACTTCCGCAACTGTCGTCGGTGTCAACACTGCCTTGCTCGCCGGGTATACAGTCGTCATGTGCCTTGGTGCTGTCCTGACAGACGCTAGTGGGAACATCCGTCAGTTCATCATGTATCCGGGTGACGAATACCTTTGGGTAACACCGGTCAACGATCTCGTTAACGCCGCAATCGGGACAGGTGGCGCGCTCGGTACCATTGCTGTACCGAGCGGTGTCAAAGTAAAGGCCAACCTTCGGTTCATGTACCAATCCGCCTCCACGACTGCGAGCGCTCTCATTCACGACCCAGCCCAAGGAAGCCTATCTGCAGGAGGCGGTAACGCAGGCGGTAACGCGGGCTCAATTCAGGTAGCAAGCGGCTACGGGGTGGGCGCTGATGAGATTTGGACCAATACCAGCAGACAGGTTCGCTATGTTGCTGGCGCTTCTGGAACGCTTAATCTTTGGACCGATGGCTTTATTTTCCCTTGCAAAAGAATCGGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3fdac11292cabbff781353676e5c86c3f4477b6573f01888acb168e7a6a9d5df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8650
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank