Protein

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Genbank accession
AAY53342.1 [GenBank]
Protein name
gp39
RBP type
TF
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MRSVVEVGVYYINSTEALALTDKPPELTGAFILVNYPTTASTSVKQEVHMFATGTTGSYVGYRWISASSVSSWWTYENTLGSQAKADKALADGKTYTDSSVNSALQAIQNSAQMYKLTADDGKPIDASAMATPPTSVASLTKTGIYYFTAAFGNTMPDTPCTGQPFWLVVLQHVTDNSISQSVTANTVAVERVVADRIITTLGVPSKWEYRAKASNFFFSASNSSRITLVSTQQNIITPNKFINNPGSLPLSAINPAITIPEDGMYQVMAALNINGILEKVYLVSELTLLINDVVHPATFGMVKTADNANGQYSLAGNGIYQLKKGDKLKLRSYCNNTGNNPYLDVDKLYISVGKIADISLFK
Physico‐chemical
properties
protein length:363 AA
molecular weight: 39220,97430 Da
isoelectric point:6,82934
aromaticity:0,09366
hydropathy:-0,04766

Domains

Domains [InterPro]
DC_1773
STR
1–91
DC_1773 IPR008983
DC_1773
STR
87–334
DC_1773
AAY53342.1
1 363
Architecture
STR
RBD
STR 1-334 | RBD 335-348 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage P100
[NCBI] 		2908172 Uroviricota > Caudoviricetes > Herelleviridae > Pecentumvirus > Pecentumvirus P100
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAY53342.1 [NCBI]
Genbank nucleotide accession
DQ004855 [NCBI]
CDS location
range 39922 -> 41013
strand +
CDS
TTGAGGTCAGTAGTCGAAGTAGGGGTTTACTATATTAATAGCACAGAAGCTCTAGCCCTAACTGATAAACCCCCAGAGCTAACAGGAGCCTTTATACTAGTAAACTACCCGACAACAGCCTCTACTTCTGTTAAGCAAGAAGTACACATGTTTGCTACAGGAACAACAGGTAGCTACGTAGGGTACCGATGGATTTCTGCTTCTAGTGTCAGCTCATGGTGGACTTATGAAAACACACTAGGTTCACAAGCTAAAGCAGATAAAGCATTAGCGGACGGGAAAACATATACTGATAGCTCAGTAAACTCCGCTTTGCAAGCAATTCAAAACTCAGCACAAATGTACAAGTTAACAGCGGATGATGGTAAGCCTATTGATGCTTCTGCTATGGCTACTCCACCAACTAGTGTAGCTTCTCTAACGAAGACAGGAATATATTACTTTACTGCCGCTTTTGGAAATACAATGCCAGATACCCCTTGCACAGGGCAACCATTCTGGTTGGTTGTTTTACAGCATGTAACAGATAACAGTATATCACAATCTGTGACAGCCAACACTGTAGCAGTAGAGAGGGTAGTCGCAGATAGGATTATTACTACTCTAGGGGTACCGAGTAAGTGGGAATACAGAGCTAAAGCCTCTAATTTCTTCTTTAGTGCTTCCAATTCGTCACGTATAACACTAGTATCGACCCAACAGAATATTATAACACCTAATAAATTTATTAATAACCCCGGTAGTTTACCACTATCTGCGATAAACCCCGCAATAACTATTCCAGAAGATGGGATGTACCAAGTGATGGCGGCCCTAAACATTAACGGTATTTTAGAAAAAGTGTACCTAGTAAGTGAGCTAACTCTACTAATAAATGACGTAGTACACCCAGCTACATTTGGAATGGTAAAAACAGCAGATAATGCTAACGGGCAGTACTCTTTAGCAGGGAATGGCATATATCAACTAAAAAAAGGGGACAAGTTAAAACTAAGAAGTTACTGTAACAATACAGGGAATAACCCTTACTTGGATGTAGACAAACTTTATATATCTGTTGGTAAGATTGCAGACATTTCATTATTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b2ebf702e7a1c5a461a53379a701e380229a9a11d8cbb25010dc94eeba8570cc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8245
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage P100 for control of Listeria monocytogenes in foods: genome sequence, bioinformatic analyses, oral toxicity study, and application Carlton,R.M., Noordman,W.H., Biswas,B., de Meester,E.D. and Loessner,M.J. 2005 16188359 GenBank