Protein

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Genbank accession
WXB48192.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVDKINITDVQEDETNVDWYADGERANALVLNRPVKQIAGVVNEIIDEVDVLSQNSGINVYRGSNGQYIQDTDVIPSDINHLAVQIGSEIIVCPYVHVSNGSQEATGVISNLNTTTRPYSLTIGGSNYILLNPKYWLLPESGVNAGAFWLDESDVNTSSLQTALNAFDKITLPEMNLKVDDSLILSKSVYQIIGGAKSRLYFDQADFPSNGSILKSLEDDRPGGGTLALSIQNVDFYAYDPTTSAPSTVLGDASAIFASGFSASNGKSEIVSCRFRGFNVAIRGSAWWATSIKKCFFRTFANTGIGIDFRPGQYTGDNGWSNAFAVNSVTIEDCWFNTLNNCIMTGDQNVQKLRMINNTFERIDNVVYTGFNSDSTTLSHNHFEYVNTPFKIGFTSSNASPVREFQFTNNNLDVISNTSFINNAENSRFQDNTVKNTSVSDFTFFNGQPSWYDNNIIEYHNGLAFSSNISTEDNSIFDVATKRETIEGALISGENTNGRYIKYPDGTMICTHTVSVTANVTETFGSLFRSAEFFTWNFPADFAVGEFPYMDVKPRTADPHFCISQNGNELGTFRVVSYQSDGALTLNISMMATGKWK
Physico‐chemical
properties
protein length:597 AA
molecular weight: 65844,09460 Da
isoelectric point:4,60489
aromaticity:0,11390
hydropathy:-0,24405

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WXB48192.1
1 597
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9866
Central domain 155 474 321 0,9777
C-terminal 475 597 122 0,9792
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-474
C-terminal
475-597

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VB_VaC_SRILMA
[NCBI] 		3133107 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WXB48192.1 [NCBI]
Genbank nucleotide accession
PP083314.1 [NCBI]
CDS location
range 88092 -> 89885
strand -
CDS
ATGGTTGATAAAATAAACATTACTGATGTTCAAGAAGATGAGACTAACGTCGATTGGTATGCTGACGGTGAACGAGCAAACGCCCTTGTACTAAATAGACCTGTAAAACAAATCGCAGGGGTTGTTAACGAAATCATAGACGAAGTTGATGTTCTTTCACAAAATTCAGGAATAAATGTTTACCGAGGTTCTAATGGACAATATATTCAAGATACTGATGTTATTCCTAGTGATATAAATCACTTAGCTGTCCAAATAGGTTCTGAAATCATCGTGTGCCCATATGTTCACGTGAGCAATGGTTCTCAGGAAGCTACTGGTGTGATTTCAAATTTAAATACGACAACACGCCCTTATTCATTAACTATTGGTGGAAGTAATTATATTCTGTTAAATCCAAAATATTGGTTACTCCCTGAAAGTGGGGTAAACGCAGGTGCGTTTTGGTTAGATGAATCCGACGTTAATACGAGTTCACTTCAAACAGCTTTAAATGCGTTTGATAAAATAACTCTCCCAGAGATGAATCTGAAGGTCGATGATTCATTAATACTGAGTAAATCAGTTTACCAAATTATAGGTGGTGCTAAGTCTAGGCTGTACTTCGACCAGGCGGATTTCCCATCGAATGGTAGTATCCTTAAATCACTAGAAGATGACCGACCAGGTGGTGGTACTTTAGCATTGAGTATTCAAAACGTGGATTTTTACGCATATGATCCCACAACTTCAGCGCCGTCTACTGTACTTGGAGATGCTTCAGCGATTTTCGCTTCTGGATTCTCAGCATCAAATGGTAAATCGGAGATCGTATCTTGTAGATTCCGTGGGTTTAACGTAGCTATACGTGGTTCAGCTTGGTGGGCTACTTCTATTAAAAAATGTTTCTTTAGAACATTCGCTAATACTGGTATAGGTATTGACTTCCGTCCTGGGCAATATACTGGAGATAATGGATGGTCTAATGCGTTTGCGGTCAACTCAGTTACAATTGAAGATTGTTGGTTCAACACATTAAATAACTGTATTATGACGGGTGACCAAAACGTTCAAAAATTAAGAATGATCAATAATACATTCGAACGAATTGACAATGTCGTATACACTGGTTTCAACTCAGATAGTACAACACTATCACATAACCATTTTGAGTATGTTAATACACCATTTAAAATCGGTTTCACTAGTTCTAATGCGTCACCAGTTCGAGAATTTCAGTTTACTAATAATAACTTAGATGTAATTTCGAATACATCATTTATTAATAATGCAGAAAACTCAAGATTTCAAGATAATACTGTTAAGAATACTTCCGTATCTGACTTTACATTCTTTAACGGACAACCTTCTTGGTATGACAATAATATCATCGAATATCATAATGGTTTGGCATTCTCTTCGAATATATCTACTGAAGATAATAGTATTTTCGATGTGGCCACGAAACGTGAAACCATCGAAGGAGCACTAATTTCTGGAGAGAATACGAACGGAAGATACATCAAATATCCAGATGGAACGATGATCTGTACTCATACTGTGTCGGTAACTGCTAATGTTACAGAAACATTTGGTTCTTTATTCCGAAGTGCCGAATTCTTTACTTGGAACTTTCCTGCTGACTTTGCTGTTGGTGAGTTTCCATATATGGATGTTAAGCCTAGAACTGCCGATCCACACTTCTGTATTTCTCAGAATGGTAACGAACTAGGAACATTTCGTGTTGTGAGTTATCAATCAGATGGGGCGCTTACGTTAAATATATCCATGATGGCTACTGGTAAGTGGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
87e0d8f0d6eeca089a1ae768b4393ee44462df87830c02fc1a3a39fe3a549df0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7129
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50