Protein

View in Explore
Genbank accession
XKC20173.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MTCSNKPNYTPFKLQGLAPTKQWGLGRSASYERFNPNEFHALEDEVKITFPVDFRGKVKGNSNSNPSRGFSHASQIYRENVLRGSQFLSKPSLLFNGAVYNEKTVYNGAMVASTQEVNQGLMFYWEDFINPDPRIKEGDMVTFSVDVRSTGEDIPTGAVAFKGTSNFEEYYKVLEQPITKEFTRISFTTRFLSKDWEWDEAFGMFWGVENVPVTDYPMFQYDKDKLVGFIQAQESVQLEFSRPMVSTIGKTAYIESGDDMFSNNKWDWSKAVSKGRLNEFDGKYNTNGIKQDWAMPEFIPIFKGSERIHFYKKTTLTETTDAGHGYGKILFYSAANESSYMNVYKKFPHEAGEYGGYAAEVEVPIGATHYRVHITSERGKATTEAYVQSSANDWSEFSQEWYDGLAGKLDGKTARAETFYRKEMVEMEFELHFAEAVQKALPNIFDGLTTDAERQQRLRDIAYQFDSTMIARGRGQGNNLADWIFYRWAPDGSIEEQTMKQFRGEGLTSVTHPSSYQEWINPQGRIVTSLRSNRIIPNSMYMGTDTLSGKYDPKLTTLQLEVNGELVDKKATLDKTSEVFTFTGLKGFLKPEDKVRIAGWNNRNNQWSITYSNVLMGNTPENIAEFNERAFVEADYLVTNMSVIVTQSQMDEWGFNPNLPDYRIESLERPASRTEEYMINSMVQVTHAYDIYGFIESNYPEFYGDCYTFDDRIRKINERIKQFNIVATTYSEEPWEDGDPTIYICAEARNPDRDYNVTSEINQTVELQINNSKGHFIHPNGYIYVGFARMPRSDRETGISVESELSFDFTMDRQYDSLPRVFRYNYQKQPWFLFVRNINRSVLAPKVNTLTPINGGTRRYNFGATEDARYISMDCFIKAPAEEDMPKLMEELADFLDVGETVIQFSDNKDRYYKVILDGSTDLSQTLHVGTLTLTFVLLENTAIGEEVVESFDIDSTTGSVPFIELENMGTADAYPTYQLTFEEPVGYVDLIGTDTSANVSIGRRPKDTEDEVKVDLRPRKFYSKFTSTDGAGWTAMNDTQLPQIEGYSTKLQGTVQRVNGMANQDKWNYGDTSHRGWHGAGIVANLQKNLDDFYMEASIVATGKPVKTSANAIFLIFYDENNNPYAYTKVGTRPQEGNLDSYVAYAGDWGKRKVVNNGAKWKDFWGKVSVQRRDNRWRLIVGQYKDRRYSPSPEASFNFGQNMLKDTRDTGWFDLPPETWGKKFARVGIFFGQYSHRPKLGHLSVRRLVVWENLEEYGEKPLEGTPILFHEGDTVVIDSSKAQAYLNGELTPSLVDPMTDWFPITKGDNYIGINNFKGKLDIVYNERFK
Physico‐chemical
properties
protein length:1330 AA
molecular weight: 152221,08530 Da
isoelectric point:5,15833
aromaticity:0,13083
hydropathy:-0,60060

Domains

Domains [InterPro]
DC_0142
STR
1–822
DC_0142 IPR006520 G3DSA:2.60.120.860
DC_0077
STR
691–1330
DC_0077
G3DSA:2.40.30.200
ATT
820–940
G3DSA:2.40.30.200 IPR054738
IPR008841
STR
862–937
IPR008841
XKC20173.1
1 1330
Architecture
STR
ATT
STR
STR 1-819 | ATT 820-940 | STR 941-1330
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKC20173.1
1 1330
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,8301
Central domain 18 246 230 0,5831
C-terminal 247 1330 1083 0,1915
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-246
C-terminal
247-1330

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage vB_LilEfe_55
[NCBI] 		3378294 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC20173.1 [NCBI]
Genbank nucleotide accession
PQ433352 [NCBI]
CDS location
range 32588 -> 36580
strand -
CDS
ATGACATGTTCTAATAAACCTAATTACACTCCGTTTAAATTACAAGGTCTAGCCCCTACTAAACAGTGGGGCTTAGGCCGTTCTGCTAGTTATGAACGGTTTAACCCAAATGAGTTTCACGCCTTGGAGGACGAGGTTAAAATTACTTTCCCAGTGGACTTTAGAGGAAAGGTTAAAGGAAACTCTAACTCAAACCCTTCACGAGGTTTTAGCCACGCCAGTCAAATCTACCGTGAAAATGTTTTAAGAGGAAGTCAATTCCTTTCTAAGCCTTCTTTGCTTTTTAATGGAGCTGTATACAATGAGAAGACAGTCTACAATGGAGCTATGGTTGCTTCTACTCAAGAAGTTAATCAAGGCTTGATGTTCTATTGGGAAGACTTTATCAATCCTGACCCAAGAATTAAAGAAGGAGATATGGTAACCTTCTCAGTTGATGTACGAAGCACTGGGGAAGATATTCCGACAGGGGCTGTGGCCTTCAAAGGGACTTCTAACTTTGAGGAATACTATAAAGTCCTTGAACAGCCTATCACAAAAGAGTTTACTCGTATCTCATTCACAACTCGTTTCCTATCTAAGGACTGGGAATGGGACGAAGCCTTTGGAATGTTCTGGGGAGTAGAGAATGTTCCTGTTACAGATTACCCAATGTTTCAATATGACAAGGATAAGTTAGTTGGTTTTATTCAGGCTCAAGAAAGTGTTCAACTAGAGTTCTCACGGCCTATGGTTTCAACTATCGGAAAGACTGCTTACATTGAGTCTGGGGACGACATGTTCTCTAACAACAAATGGGACTGGTCTAAAGCCGTATCTAAAGGTCGTTTAAATGAATTTGATGGTAAGTATAACACAAACGGAATCAAACAAGACTGGGCAATGCCTGAGTTCATTCCTATTTTCAAAGGCTCTGAGAGAATCCATTTCTACAAAAAGACTACTTTAACTGAAACAACAGATGCTGGGCATGGCTATGGTAAAATCCTATTCTACAGTGCTGCTAATGAATCTTCTTATATGAACGTATACAAGAAGTTCCCCCACGAGGCTGGAGAATATGGTGGATACGCTGCTGAAGTAGAAGTTCCTATTGGAGCTACTCACTATCGTGTTCACATAACTTCTGAAAGAGGAAAGGCCACTACAGAAGCCTATGTACAATCTTCTGCTAACGATTGGTCAGAGTTTAGTCAAGAGTGGTATGATGGCTTGGCTGGAAAACTTGATGGAAAGACTGCCAGAGCTGAGACATTCTATCGTAAAGAAATGGTTGAAATGGAATTTGAACTACACTTTGCTGAGGCTGTTCAGAAAGCTTTGCCTAACATCTTTGATGGTCTTACTACAGATGCTGAAAGACAACAAAGACTTCGTGACATTGCTTATCAATTCGATTCAACAATGATTGCACGAGGACGTGGACAAGGCAATAACCTAGCTGACTGGATTTTCTATCGGTGGGCACCTGACGGCTCTATTGAAGAACAAACAATGAAGCAGTTTAGAGGAGAGGGATTAACTTCAGTTACCCATCCATCTAGCTACCAAGAATGGATTAATCCACAGGGTAGAATTGTCACATCGCTACGCTCTAATCGAATCATTCCTAACTCAATGTACATGGGAACAGATACGTTAAGTGGTAAGTACGACCCTAAATTAACAACGCTTCAGCTGGAAGTTAATGGAGAGCTTGTCGATAAGAAGGCCACCTTAGATAAAACTTCTGAAGTGTTTACATTTACAGGTCTTAAAGGATTCCTAAAACCAGAGGACAAGGTTAGAATCGCTGGGTGGAATAACCGTAACAACCAGTGGTCAATCACTTACTCTAATGTTCTTATGGGAAACACTCCAGAAAACATTGCAGAGTTTAACGAGCGTGCCTTTGTTGAGGCGGATTACCTTGTTACAAACATGTCAGTAATCGTAACTCAATCTCAAATGGACGAGTGGGGATTTAATCCTAACTTACCAGATTATCGGATAGAGTCACTAGAACGTCCTGCAAGTCGTACAGAAGAGTACATGATAAACTCTATGGTACAGGTAACACATGCCTATGATATTTACGGATTTATCGAAAGCAACTACCCTGAGTTTTACGGAGACTGCTACACGTTCGATGACAGAATTAGAAAGATAAACGAACGAATCAAACAGTTTAACATTGTGGCTACCACCTATTCAGAAGAGCCTTGGGAAGACGGAGACCCTACCATCTACATTTGTGCTGAGGCTAGAAACCCAGATAGAGACTACAATGTAACTTCTGAAATAAATCAAACAGTAGAGCTTCAAATTAACAATTCTAAGGGACACTTTATCCATCCTAATGGTTATATCTACGTAGGATTCGCTAGGATGCCTAGAAGCGACCGAGAGACAGGAATCTCAGTGGAGTCTGAATTAAGCTTTGACTTTACGATGGACAGACAGTATGACAGCCTTCCAAGAGTCTTCCGATACAACTATCAGAAGCAGCCTTGGTTCTTGTTTGTAAGAAACATTAACAGAAGCGTTCTTGCCCCTAAAGTAAACACTCTAACTCCTATTAACGGAGGTACTAGACGCTATAACTTTGGAGCTACCGAAGACGCTCGGTATATCTCAATGGACTGCTTTATCAAAGCTCCTGCTGAAGAGGATATGCCTAAGTTGATGGAAGAGCTTGCTGACTTCCTAGACGTTGGAGAAACGGTAATCCAATTCTCTGATAACAAAGACCGCTACTACAAAGTGATTCTGGATGGTTCAACAGACCTTTCCCAAACACTTCACGTAGGTACGTTGACACTGACTTTCGTACTGCTTGAGAATACAGCCATTGGCGAAGAGGTTGTAGAAAGCTTTGACATAGACAGTACAACTGGTTCAGTTCCATTCATTGAGCTTGAGAACATGGGTACGGCGGACGCTTACCCTACCTACCAACTGACCTTTGAAGAGCCTGTAGGATATGTTGACCTAATCGGTACAGATACCTCAGCCAACGTGTCAATTGGAAGACGTCCTAAAGATACTGAAGACGAGGTTAAAGTAGACCTTCGTCCTCGTAAGTTCTATAGTAAGTTTACATCTACTGATGGAGCTGGATGGACGGCTATGAATGATACTCAACTTCCTCAGATTGAAGGGTACTCAACTAAGCTTCAAGGAACTGTCCAAAGAGTTAATGGAATGGCCAATCAAGACAAGTGGAATTACGGAGACACTAGCCACAGAGGATGGCATGGAGCTGGTATCGTAGCTAACCTTCAAAAGAACCTTGACGACTTCTATATGGAAGCCTCTATCGTAGCTACAGGAAAGCCAGTTAAAACTTCTGCTAATGCTATTTTCTTGATATTCTATGACGAAAACAACAACCCATATGCTTACACTAAGGTTGGTACACGGCCTCAAGAGGGTAACTTAGACAGCTACGTAGCTTACGCAGGTGACTGGGGTAAACGTAAAGTAGTTAACAATGGAGCTAAGTGGAAAGACTTCTGGGGTAAGGTTTCCGTACAGCGCAGAGATAACCGATGGAGACTTATTGTAGGTCAATACAAAGACCGTAGATACAGCCCTTCACCTGAAGCTTCATTCAACTTTGGTCAGAACATGTTGAAAGACACAAGAGACACAGGCTGGTTTGACTTGCCTCCTGAAACTTGGGGTAAGAAGTTTGCAAGGGTTGGGATATTCTTCGGACAGTATTCACATAGACCTAAACTAGGCCACCTTTCAGTGCGTAGATTAGTCGTGTGGGAAAACCTTGAGGAATACGGAGAAAAACCTTTAGAAGGAACTCCAATCCTATTCCACGAAGGTGACACTGTAGTAATTGACTCAAGCAAAGCTCAAGCATATCTTAATGGAGAACTTACTCCATCGCTAGTAGACCCAATGACTGACTGGTTCCCTATAACCAAAGGTGACAACTACATTGGAATAAACAACTTCAAAGGTAAGCTTGACATAGTATATAACGAACGATTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b8b4c9d4cf6968afb11383783e59c9f4bd01231622b73f1ae854cd0bca18d2b7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6534
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50