Protein

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Genbank accession
WKW84208.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLKVGTTIGGSPAWNQGNLPLVPSGVKILYKGNRIYSEADKPTADELNVVSRDGDTMTQRLTIATTNDYPLAFNSTDSGPSKILFQRAGTTRMVMGMDAAGNFQLSANDAAGAHFGYGLQIWNSSLDAAFGGSIQMPDNKSWYIGKGGNPVLRDHNNGNVTLSALPKSDGNPGDLYLGWNGTGAVTNTVRLESALTWKAIRTLVNADGYVLRTAMDNPYFNQTEADARFLRKNVNTVTDSYLLTKSVDYSAGTDAIPAGYSGFFRNNSSNGFMGLTMHVAHPSYANGAYARGFTFNYGGSNTVYTYAFDSAGNKQANIKVYTEADKPTPGEIGALEVSANAVSASKLATGRRISLSGGASGSVVFDGSSDVVIPVTVANNSHTHSDYVQKTGDTMTGDLIVNAKVIANELQAGNATHKARIVQSGSAVYFQGGSVDTAAANNVAMSGWMGGNLDLFQVRMIDGRSPVVRWNNIDYRMFHEGNRPSDLVSISLSGKSCNDAIESGFYSIFSGTTDTPFGSGPSGSTMVVARWGTTGVQQTFYNYNSDRVFVRRLEAGVWKPWFELYSTSNKPSAADVGALPVGANAVSATRLQTARLISGVPFDGTSNITISANNVGAYSKSETDDLIKDSGKKTVIVNKPAGITADFYVPVMLAGLRNHEDVYISTKTTGGSDPMNNCSFNGVVRSGGWSDQNSYVTGQFSIYQANERALHSVYGGTEADGVVAFYVHEKAFPITVVVDGSVNVTAGATQQNGTTIFTASAAPAAGNTKATLLAEWADGSGFYQGSSKTPTGQNMNAELDKKLNLSGGIMTGAIRWDATDEYINAAGNNIYLAAKSGRVYLEGQLDPMVRMGSNNYLIYHEGNKPSAGDFNAYTKGETDNLLNGKLSLSGGIMTGQLTVANMKSAVKVDSQRSISFQDQGNTMYHLLAEGNYLKVKHGNSAQTQILQISASGIESATTVFARGGLISQDSTSTKWLSMETPANANPYIAVRSTGDAANRVAMTFEKGAIRVATDTVVAPSMLIENNGGLVLAPNTSRAGITWGMGIDASTREFNIHRYSDGNWQALPVIIRTNGVLHAASGLSTSSVYSTGTIGVDGALTAGSINVTGGYMSLTSASNTLLEFHTPGRTAAMIYKGPEGNLRFVTSNGAGGESMLRMQLDTSGNMAVMGAVNATTNVTGNGVYDAGNRVYSASNPIPDGVIMRSVTNAGWSAAVGIGAYAMVTVKANIGLVGPGTVVQGTQINFSNAEGTNLVACNYGQWRLMGVSRAQSRNGDGWGSWNVTLAQRIT
Physico‐chemical
properties
protein length:1290 AA
molecular weight: 136038,92430 Da
isoelectric point:6,65013
aromaticity:0,08372
hydropathy:-0,20008

Domains

Domains [InterPro]
DC_0238
RBD
1–196
DC_0238 cd19958 DC_1142 DC_1924
DC_1150
STR
157–589
DC_1150
WKW84208.1
1 1290
Architecture
RBD
STR
STR
RBD
RBD 1-156 | STR 157-589 | STR 741-926 | RBD 945-1290
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKW84208.1
1 1290
Domain Start End Length (AA) Confidence
N-terminal 1 610 610 0,1551
Central domain 611 823 214 0,7363
C-terminal 824 1290 466 0,7685
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-610
Central
611-823
C-terminal
824-1290

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage GomatiRiver_11
[NCBI] 		3003697 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas sp.
[NCBI] 		647 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKW84208.1 [NCBI]
Genbank nucleotide accession
OP967013.2 [NCBI]
CDS location
range 28732 -> 32604
strand +
CDS
ATGGCAGATCTGAAGGTAGGAACTACTATTGGTGGTTCACCAGCTTGGAACCAAGGTAATTTGCCATTAGTTCCAAGCGGCGTTAAAATTCTTTATAAAGGAAATCGAATTTATTCAGAAGCAGATAAACCAACTGCTGATGAATTAAATGTTGTCAGTCGTGATGGCGATACAATGACTCAGCGGTTGACGATTGCTACAACAAATGATTATCCTTTGGCTTTTAATTCAACTGATTCTGGTCCTTCAAAAATCCTTTTCCAACGTGCTGGTACAACACGTATGGTAATGGGTATGGATGCAGCTGGTAATTTCCAGTTATCCGCAAATGACGCTGCCGGCGCTCACTTCGGATATGGATTGCAAATCTGGAATTCTTCACTTGATGCTGCATTTGGCGGAAGTATCCAAATGCCGGATAATAAAAGTTGGTATATTGGAAAGGGTGGAAATCCAGTATTACGTGACCACAATAACGGAAATGTGACGTTATCCGCATTGCCAAAATCGGACGGTAACCCTGGTGATTTATACCTTGGTTGGAATGGTACTGGTGCCGTGACAAATACCGTTCGACTTGAATCAGCATTGACGTGGAAAGCTATCCGTACACTGGTCAATGCTGATGGTTATGTTTTGCGCACCGCAATGGACAATCCATATTTCAACCAAACCGAAGCTGATGCCCGTTTTTTACGTAAAAACGTAAACACTGTCACCGACAGTTACTTGTTGACTAAATCTGTAGATTATAGTGCTGGCACTGACGCTATTCCTGCTGGATATTCTGGTTTTTTCAGAAATAATAGTTCAAATGGGTTCATGGGATTAACCATGCACGTGGCTCATCCAAGTTACGCTAATGGCGCATATGCCCGTGGTTTTACATTTAACTATGGTGGAAGCAACACTGTTTACACCTATGCTTTTGATAGTGCTGGCAACAAGCAGGCAAATATCAAAGTCTACACAGAGGCTGATAAACCAACCCCTGGTGAGATTGGGGCACTTGAGGTTAGTGCCAATGCTGTTTCAGCATCAAAACTCGCCACAGGCCGCCGTATCAGCCTTAGTGGTGGTGCTTCTGGTTCAGTTGTGTTTGATGGTTCAAGTGACGTTGTGATTCCAGTAACCGTGGCAAATAACAGCCACACTCATAGTGATTATGTTCAAAAAACTGGCGACACAATGACCGGTGACTTGATTGTTAACGCTAAAGTTATTGCAAATGAATTGCAAGCTGGTAACGCAACACATAAGGCCCGGATTGTTCAATCTGGTAGTGCAGTATATTTCCAGGGTGGCTCGGTTGATACAGCTGCCGCAAATAACGTTGCTATGTCTGGTTGGATGGGTGGAAACCTTGACCTTTTCCAGGTGCGAATGATTGACGGCCGTTCACCTGTTGTTCGCTGGAATAACATTGACTACCGTATGTTCCACGAAGGCAATCGCCCATCAGATTTGGTTTCTATCAGTCTGTCCGGTAAATCATGTAATGACGCTATTGAATCTGGTTTTTATTCAATTTTCAGCGGAACAACAGATACACCATTTGGTTCTGGGCCTTCCGGTTCAACAATGGTTGTTGCAAGATGGGGTACTACTGGAGTTCAGCAAACTTTCTACAACTACAATTCTGACCGCGTGTTCGTGCGACGTTTAGAAGCTGGTGTGTGGAAACCTTGGTTTGAACTTTATTCGACATCAAATAAACCAAGTGCTGCTGATGTTGGCGCGCTTCCTGTTGGTGCAAATGCTGTATCTGCAACTCGTTTGCAAACTGCACGACTGATTTCGGGTGTTCCATTTGATGGTACTTCGAATATCACAATTTCAGCTAACAATGTTGGTGCTTATTCAAAATCTGAAACTGATGATCTGATTAAGGATTCTGGAAAGAAAACAGTAATTGTTAATAAGCCTGCAGGAATTACCGCCGATTTTTATGTCCCAGTAATGCTTGCTGGACTTCGAAATCATGAAGATGTGTACATCAGCACCAAAACGACTGGTGGCAGTGACCCGATGAACAATTGTTCATTTAATGGGGTTGTTCGTTCTGGCGGCTGGTCTGATCAAAATAGTTATGTGACAGGCCAATTTTCAATTTACCAGGCAAATGAGCGCGCTCTACACTCTGTTTATGGTGGAACTGAAGCTGATGGAGTTGTTGCTTTTTATGTCCACGAAAAGGCGTTCCCAATCACAGTTGTAGTTGACGGCTCTGTTAATGTTACTGCGGGTGCAACACAACAAAATGGTACAACCATTTTTACCGCATCTGCCGCCCCCGCGGCAGGAAATACTAAAGCAACATTGCTTGCTGAATGGGCAGATGGGTCGGGTTTCTATCAGGGTTCATCGAAAACGCCAACCGGCCAGAACATGAACGCTGAACTGGATAAGAAATTGAACCTTTCTGGTGGAATCATGACTGGTGCGATTCGTTGGGATGCAACCGACGAGTATATTAATGCTGCTGGCAATAATATATATCTGGCTGCGAAGTCGGGTCGTGTTTATCTTGAAGGTCAGTTAGATCCAATGGTTCGGATGGGTAGTAACAACTACCTGATTTACCATGAAGGCAATAAGCCATCTGCAGGCGATTTTAACGCATACACCAAAGGTGAAACAGATAATCTTCTCAATGGCAAATTGAGTCTTTCAGGTGGAATAATGACAGGCCAATTGACTGTCGCTAATATGAAGAGCGCAGTTAAAGTCGATTCACAACGTTCTATTAGTTTCCAAGACCAAGGTAATACGATGTATCACCTATTGGCAGAAGGTAACTATCTGAAAGTCAAGCATGGTAATTCTGCTCAAACTCAGATTTTGCAAATAAGTGCGTCTGGAATAGAATCTGCTACTACGGTTTTTGCACGAGGTGGATTGATTTCTCAAGATTCAACCAGTACAAAATGGTTGAGTATGGAAACTCCGGCAAATGCTAATCCATATATTGCAGTTAGATCAACAGGTGATGCAGCGAACCGTGTTGCCATGACATTCGAGAAAGGTGCTATTCGTGTTGCAACTGACACAGTTGTTGCTCCTTCTATGTTGATTGAAAATAATGGTGGTTTAGTTCTTGCGCCAAATACTAGCCGAGCTGGTATAACATGGGGAATGGGGATTGACGCCTCAACCCGCGAGTTCAACATTCACCGGTATTCTGACGGAAACTGGCAAGCTCTGCCGGTCATCATTAGAACAAATGGTGTACTGCATGCGGCATCTGGATTAAGTACGAGTTCAGTTTATTCTACTGGTACTATCGGCGTAGATGGTGCCTTGACAGCCGGGTCAATTAATGTTACTGGTGGTTATATGTCGTTGACTAGTGCCAGCAACACATTGTTGGAGTTCCATACCCCGGGTCGCACGGCGGCAATGATCTATAAAGGTCCTGAAGGAAACCTGCGCTTTGTTACTTCCAACGGTGCTGGTGGCGAGAGTATGCTGCGTATGCAACTTGATACATCCGGTAACATGGCTGTTATGGGTGCTGTTAACGCAACAACTAACGTCACAGGAAATGGTGTTTATGACGCCGGCAACCGTGTTTATTCCGCAAGTAATCCAATTCCAGACGGTGTTATCATGCGGTCGGTTACAAACGCCGGCTGGAGCGCCGCAGTAGGCATTGGTGCTTATGCTATGGTTACTGTTAAAGCCAATATAGGTCTTGTTGGGCCAGGTACTGTTGTTCAAGGCACTCAGATTAATTTCTCGAATGCTGAAGGCACAAACCTTGTTGCATGTAACTATGGTCAATGGCGTCTGATGGGTGTTTCACGAGCGCAGTCCCGAAACGGCGACGGTTGGGGTTCTTGGAACGTAACATTAGCACAACGTATTACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3e94a4237e83d6811a417c41827f4b0264d425392a1e0c66ed73bb1d6e2c87f8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5149
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas phage GomatiRiver_11 Sahoo,L., Parhi,J., Kalappa,G.S., Debnath,C. and Tripathy,P.S. 2023 — GenBank