Protein

View in Explore
Genbank accession
YP_009847628.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MTAPSFTPTSDSRIKSDFVKIENCLEVIKNFTPYNYQKKGLEGREDGLVAQDVQRTLPDSVKVVSTDESLYGFTDVLGVNYSSVTAVNSGAINELHDLVKQLQEEIKVLKDVINSK
Physico‐chemical
properties
protein length:116 AA
molecular weight: 12869,34170 Da
isoelectric point:4,92791
aromaticity:0,06897
hydropathy:-0,33621

Domains

Domains [InterPro]
DC_0421
STR
2–116
DC_0421
IPR030392
CHP
10–106
IPR030392
IPR030392
CHP
10–62
IPR030392 Coil
YP_009847628.1
1 116
Architecture
STR
STR 2-116
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage LAh_9
[NCBI] 		2591033 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009847628.1 [NCBI]
Genbank nucleotide accession
NC_048776.1 [NCBI]
CDS location
range 97635 -> 97985
strand -
CDS
ATGACTGCTCCTTCATTCACACCAACTTCAGACTCAAGGATTAAATCTGACTTTGTTAAGATTGAAAATTGTCTTGAAGTAATCAAAAACTTTACTCCATATAACTACCAGAAGAAAGGTTTGGAAGGAAGGGAAGATGGTTTAGTCGCACAAGATGTTCAGAGAACATTACCAGATTCTGTGAAGGTGGTCTCTACGGATGAAAGTTTGTATGGGTTTACTGATGTATTAGGCGTTAACTACTCAAGTGTCACTGCCGTAAACTCTGGGGCAATTAATGAGTTGCACGATCTTGTAAAACAATTACAAGAAGAGATTAAGGTTTTGAAGGATGTAATTAACTCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9434081025e52543faf2c117e53114007ee4c4c42dcf8ab810201365a12360fb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8620
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages capable of disrupting biofilms from clinical strains of Aeromonas hydrophila with intrinsic antibiotic resistance Kabwe,M., Brown,T.L., Speirs,L., Ku,H., Leach,M., Chan,H.T., Petrovski,S., Lock,P. and Tucci,J. 2020-02-14 — GenBank