Protein

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Genbank accession
YP_007672923.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,73
Protein sequence
MTLRNVPKAHTLEQQRQEINLIASDLDNAVEGTKTFGGSKTFSSDVTFQSTVDFDGIATFNSSPTFSDNVAANFGDDADLKIYYDGSVGVLTSFIDSDALQIRSKTDTSELYLTALKDGPVELYYDGAKKIGTNLTGATVLGDLEVNDELHSASGSFIIKTADQITPGQMVTEAVFGGSMYVPYGFSTYPIAEFPGGGINETSTNAGFSVSNGGQIYIANISAQALWKGRQVGTAGITSEIDAAGNVTFAGTLDIGSTATFDGTVDFNDAVDVNAHVEFKAASGNSSLYMYDENAINLGSNNDARLIYNNTGNIVKFERLTAGEIEIDAAPVTLQHSNSTKLQTTSTGVTVTGTLDATAFTVGGSPFTAGSVATTSSTGVVQPDGTTIAVDSNGVISVAGGGDPFTANGFKFGVNEGSGPTATQGEIRQISGKPHFYDGSNWQEFILGSTQTATIPAETDWDKVLLRSTFDSDFNDVKFGDTGTAQIYGGIAASTLVGTPANYGAKVLKTVGNGVRYDDRSDYDFTNTFTLEFWINIDSAPNASLTGVNDKYVIVSKSAGTLAGSNNKTAGATGGGWQLYYAYVGVNIGWRLDIHDTATNTTSTIGFQTDSSTVFASKFVQSWNHIALVKESDGQLHFYVNGLEDITWTKGTSYSGTNMSNTSEPILFGGSQVSTNTAGIVDAYIDDIRFTKDARYTSSQSSNTQSFTPPAAAHPVSGTTTTYTPPATSKAGEITLGATPTWTGTAGATVSRQSAGNYELNFTSPFTNATDYYVIANVMDINGTTNLEITRSADKIAFSVLAGGSATDSGSIAVQVIAHS
Physico‐chemical
properties
protein length:820 AA
molecular weight: 86039,03830 Da
isoelectric point:4,41675
aromaticity:0,09634
hydropathy:-0,17549

Domains

Domains [InterPro]
DC_0955
STR
150–586
DC_0955 DC_0994
IPR013320
STR
457–696
IPR013320
G3DSA:2.60.120.200
STR
461–695
G3DSA:2.60.120.200
YP_007672923.1
1 820
Architecture
STR
RBD
STR 150-696 | RBD 697-820
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM1
[NCBI] 		754037 Uroviricota > Caudoviricetes > Pantevenvirales > Anaposvirus > Anaposvirus socalone
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007672923.1 [NCBI]
Genbank nucleotide accession
NC_020837 [NCBI]
CDS location
range 6054 -> 8516
strand -
CDS
ATGACACTACGTAACGTACCAAAGGCGCATACGCTGGAACAGCAGCGTCAAGAGATTAACTTAATTGCATCTGATCTCGATAATGCGGTCGAGGGCACGAAAACATTTGGTGGGAGTAAAACATTCTCTAGTGATGTAACATTCCAAAGCACTGTAGACTTTGACGGCATTGCAACATTCAATAGCAGTCCTACCTTTTCTGATAATGTAGCAGCAAACTTTGGTGATGATGCTGACCTAAAAATTTACTACGATGGATCTGTAGGTGTCCTAACATCATTCATTGATTCTGATGCTTTGCAGATCAGATCAAAGACTGATACTAGTGAACTGTATCTCACAGCTCTCAAAGATGGTCCTGTCGAACTTTACTATGACGGTGCTAAAAAAATTGGAACTAATCTTACAGGTGCGACAGTTTTAGGAGATCTCGAAGTTAATGACGAGTTACATTCTGCATCAGGTAGTTTTATTATTAAAACGGCAGATCAGATAACTCCTGGTCAGATGGTTACTGAAGCTGTCTTTGGTGGATCAATGTATGTACCATACGGTTTTAGTACATATCCTATTGCTGAATTTCCTGGTGGTGGTATCAACGAGACATCTACTAATGCTGGATTTAGTGTAAGCAACGGTGGACAGATTTATATTGCTAACATTAGCGCACAGGCTCTTTGGAAGGGTAGACAAGTAGGAACTGCTGGAATCACATCAGAAATCGATGCTGCTGGTAATGTCACGTTTGCTGGCACCCTAGACATTGGTAGCACTGCTACTTTTGATGGTACTGTTGATTTCAATGATGCTGTTGATGTAAATGCACACGTTGAATTCAAAGCAGCTAGTGGAAATAGTTCACTATACATGTATGATGAGAATGCAATTAATCTTGGTAGTAACAATGATGCAAGATTAATTTATAACAACACTGGAAATATTGTTAAATTTGAAAGATTAACTGCTGGTGAAATTGAAATTGATGCTGCACCAGTTACACTTCAACACTCTAATAGTACAAAATTACAGACTACCTCCACTGGTGTAACAGTCACAGGAACTCTTGATGCTACGGCATTCACAGTTGGTGGTTCTCCATTCACTGCAGGTAGTGTCGCAACCACATCTTCTACTGGTGTTGTACAACCAGATGGCACAACCATCGCTGTTGATAGCAATGGTGTTATCAGCGTAGCTGGTGGTGGCGACCCATTCACTGCTAATGGATTCAAGTTTGGCGTCAATGAAGGATCTGGTCCAACAGCAACACAAGGTGAGATCAGACAGATTAGTGGTAAACCACATTTTTATGATGGAAGTAACTGGCAAGAGTTTATTCTTGGTAGCACTCAAACAGCTACTATCCCAGCAGAAACTGATTGGGATAAGGTTCTATTAAGATCCACTTTCGATAGCGATTTTAACGACGTAAAGTTTGGTGACACTGGCACTGCTCAAATTTATGGCGGTATAGCTGCCTCAACCCTTGTAGGAACCCCCGCCAATTATGGAGCGAAAGTTCTAAAAACAGTTGGTAATGGTGTTAGGTATGACGACAGAAGTGACTATGATTTCACTAACACATTTACATTAGAGTTTTGGATTAATATAGATTCCGCACCAAACGCTTCTCTGACTGGGGTAAATGATAAGTATGTTATTGTATCAAAATCTGCTGGTACTCTTGCTGGAAGTAATAATAAAACTGCAGGAGCGACAGGTGGTGGATGGCAACTATATTATGCGTATGTTGGTGTTAACATAGGATGGAGACTTGACATACATGATACAGCTACTAATACAACTAGTACCATAGGTTTTCAAACCGATAGTAGCACGGTTTTTGCTAGCAAATTTGTACAAAGTTGGAATCATATTGCTTTAGTAAAAGAATCTGATGGACAACTTCATTTTTATGTAAATGGTCTAGAAGATATCACTTGGACAAAGGGAACCTCCTATAGTGGCACCAATATGTCCAATACTTCCGAACCAATTTTATTTGGAGGAAGTCAAGTATCTACTAACACTGCTGGTATTGTTGATGCATATATTGACGATATTCGTTTTACAAAAGATGCTAGATATACATCATCTCAAAGTAGTAACACGCAATCTTTCACACCACCAGCAGCAGCACATCCTGTCAGTGGCACTACGACAACTTATACACCACCTGCAACTAGCAAGGCTGGTGAGATTACGCTAGGTGCAACTCCTACGTGGACTGGAACAGCAGGAGCAACGGTGTCACGGCAATCTGCTGGCAACTATGAGCTGAACTTTACAAGTCCATTTACTAATGCCACTGACTACTATGTTATTGCTAATGTCATGGATATTAATGGAACAACGAATTTAGAAATAACGAGATCTGCTGACAAGATAGCTTTTAGTGTCCTAGCGGGGGGAAGTGCCACTGATAGTGGATCGATCGCTGTCCAAGTTATTGCACACTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2123de3ea7f654d991d814071c10913d60b3bba5952511f02d8bccbd3fd7be32
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-CAM1 0208SB26 Henn,M.R., Martiny,J., Weihe,C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank