Protein

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Genbank accession
XWX33357.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLPGTYEIKSRIKIYDNTTIIMTNQTKLLRCHNGGFFDNGDLNNNVGGYDGVSNITIIGGILDNNYENIDKYPTKQINMIALRHAKNITIKDLTFRNGITVHCVDMNGSKDVMFDGCRFEGYVNLNNASYKEALQISEYVTGGIDGGIFDGTPCKNITVKNCTFSSSDILGGYDVCIGNHITANNVFNSNIKIYNNTFKDCNIAIRDWKWNDLDIHGNTFINNKECLRASSIGSSYESAKNIDGTPSNQSQATRNLIFNENKIYNFTSVGIGIYGIQDNDTAFIENVKIKDNYIKGTGQGIISSLVKDIVIEGNDIEDTYRAIKYSATKNIRVLNNTISNSKTEAIYGDVSNYGDIHSINYNSIIKHNIIDNTQKNGVFISTGDIINITDNVITNSNMINEENNKRGSIKVDYSDKCIINNNSLYGQTESFAIQATTSTNVISNNNNTNIQE
Physico‐chemical
properties
protein length:452 AA
molecular weight: 50178,27510 Da
isoelectric point:5,47470
aromaticity:0,08407
hydropathy:-0,42146

Domains

Domains [InterPro]
IPR012334
STR
2–326
IPR012334 IPR006626 IPR006626 IPR006626
IPR011050
STR
3–278
IPR011050 IPR006626 IPR006626
IPR006626
Unmapped
85–108
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR039448
ENZ
254–396
IPR039448
IPR011050
STR
254–447
IPR011050
XWX33357.1
1 452
Architecture
STR
STR 2-447 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX33357.1
1 452
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,3447
Central domain 11 441 432 0,9966
C-terminal 442 452 10 0,2955
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-441
C-terminal
442-452

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_40
[NCBI] 		2815627 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus vitulinus
[NCBI] 		71237 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX33357.1 [NCBI]
Genbank nucleotide accession
MZ417333.1 [NCBI]
CDS location
range 56262 -> 57620
strand +
CDS
GTGTTACCAGGAACTTATGAAATTAAAAGTAGAATTAAGATATATGATAACACTACAATAATAATGACTAATCAAACAAAATTACTAAGATGTCATAATGGTGGTTTCTTTGATAATGGAGACCTCAATAATAATGTAGGTGGTTATGATGGTGTGTCTAACATTACTATTATAGGTGGCATATTAGATAATAATTATGAAAATATAGACAAATATCCTACTAAACAAATAAATATGATAGCTCTAAGACATGCTAAAAATATAACAATTAAAGACTTGACATTCAGAAATGGTATAACGGTTCATTGTGTAGATATGAATGGTAGTAAAGATGTTATGTTTGATGGGTGTAGGTTTGAGGGTTATGTTAATCTTAATAATGCATCATATAAAGAGGCTTTACAAATATCTGAATATGTTACTGGGGGTATAGATGGTGGAATATTTGATGGTACACCATGTAAGAACATAACTGTTAAGAATTGTACATTTAGTAGTTCTGATATTTTAGGTGGGTATGATGTATGTATAGGTAACCATATAACAGCTAATAATGTGTTTAATAGTAACATTAAAATATATAATAATACTTTTAAAGATTGTAATATTGCTATACGAGATTGGAAGTGGAATGACTTAGATATTCATGGTAATACTTTTATTAACAACAAAGAATGTCTAAGAGCATCGTCTATAGGTAGTAGTTATGAAAGTGCTAAAAATATAGACGGAACACCAAGTAACCAATCTCAAGCTACTAGAAATTTAATATTTAATGAAAATAAGATATATAATTTTACTAGCGTAGGTATAGGTATATATGGTATACAAGATAATGATACAGCTTTTATAGAAAATGTCAAGATAAAAGATAATTATATTAAAGGTACAGGTCAAGGTATTATAAGTAGTTTAGTTAAAGATATAGTTATAGAAGGTAATGACATAGAGGACACTTATAGAGCTATTAAATATAGTGCAACTAAGAATATTAGAGTACTAAATAATACAATAAGTAATTCTAAGACTGAAGCTATATATGGAGATGTATCAAATTATGGAGATATACACTCTATAAATTATAATTCTATTATAAAACATAATATTATAGATAATACACAAAAAAATGGTGTATTTATTTCTACAGGAGATATTATTAATATTACAGATAATGTAATAACTAACTCTAATATGATTAATGAGGAAAACAATAAGAGGGGAAGTATTAAAGTAGATTATAGTGATAAGTGCATTATAAATAATAACTCTCTATATGGTCAAACAGAAAGTTTTGCTATACAAGCAACAACAAGCACTAATGTAATCTCAAATAATAATAATACAAACATACAAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
362fb2bdddaa3e4612d2ed39fa16340119bcf0048fa72b30962cfee22930ac61
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9431
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank