Protein

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Genbank accession
QLB38234.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLYRIQSTALGQSGNTLLILPGASVTVLDSTGALARIYADPGEVTELPNPTLADTSGGYDFYVAYGDYFDVSVSLNGQTVDDRIYPIEVGLGARVEAAATDATAQAVTATTQAGISTAQAVISTAQADIATTQAGIATTKAGAASTSAANAALFDGPRFATIAEAAAHTGYTDGGFAIINPTGETFQYDAASTATADGALIVDATGMGVGRLISKRTVFASFAQFIADARTFTAGTTLTIPSIGAVYQSTAGAGHVTNAGGQAFDVLPNEAGFNAQAFGALGDWDGTGTDDRDAIQSAFDAANGVSVIFPKTDAAYYIATPLTMANGATWKARSNGAKLTAATDMFDNFGASVDFEGLELDGGVDCFDFKAATAISAIDFRLAGCGVKNFTGPAIRSSTAQTFAVQFDSFILDDCTFQGNRIDALVQQYDLKLVKVRGNSFLDGGEESLNLQGGPNQGADYVITGNVFRNYTNNLLGPDADGHFIRCYGERAVIDGNVFDTLNIGPSTVGGDTEGLRPNCDQVVITNNVFRDAGMAEAVVTLKNCRESLVQGNSFECSDAYNAAAIASGFYTVGVLADYNAQIIGNTFNNFNGAIVDVQDGNPNLGTIVIEGNLIIDSLCNQFSSSQLFRLTAPSTVYVVRNNTVKTSEAVDVLPLNIFRVSSGASEYYVEGNIFKMTGTVFENVNGNSKIYTKNNTYKNGTRIIAAGTCGKFRSKNDTWQHDTGPAFTSFFGSGDVPHKDFIVDNMGIDMTPSDYRFIGIKTTGDCVGYVNAELSWRDVGDAATAVDQSKSFIRSTTGVMSIDATPTANFYAIGTPTGTAAVPAVISGFVCIRRPTNFLSGSKVRGKISIGVERV
Physico‐chemical
properties
protein length:856 AA
molecular weight: 89634,47330 Da
isoelectric point:4,50662
aromaticity:0,09463
hydropathy:0,01787

Domains

Domains [InterPro]
IPR011050
STR
268–535
IPR011050
IPR012334
STR
272–654
IPR012334
IPR011050
STR
275–535
IPR011050
QLB38234.1
1 856
Architecture
STR
STR 268-654 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLB38234.1
1 856
Domain Start End Length (AA) Confidence
N-terminal 1 288 288 0,9939
Central domain 289 729 442 0,9796
C-terminal 730 856 126 0,9594
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-288
Central
289-729
C-terminal
730-856

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfitobacter phage phiGT1
[NCBI] 		2745703 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Sulfitobacter sp. HGT1
[NCBI] 		2735435 Pseudomonadota > Alphaproteobacteria > Rhodobacterales > Roseobacteraceae > Sulfitobacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLB38234.1 [NCBI]
Genbank nucleotide accession
MT584811.1 [NCBI]
CDS location
range 19137 -> 21707
strand +
CDS
ATGCTTTATCGGATTCAATCCACAGCCCTTGGGCAATCTGGAAACACGCTTTTGATCCTGCCCGGCGCTTCGGTGACTGTGCTGGATTCAACGGGCGCATTGGCACGCATCTACGCCGATCCAGGCGAGGTGACAGAACTGCCAAACCCGACGCTTGCCGACACGTCGGGCGGGTATGACTTTTATGTTGCATATGGTGATTATTTCGATGTTTCCGTTTCGCTGAACGGGCAGACTGTTGACGACCGCATTTACCCGATTGAGGTGGGCTTGGGCGCACGGGTTGAGGCTGCGGCGACTGATGCCACGGCGCAGGCTGTTACAGCAACGACACAAGCTGGCATTTCCACAGCGCAGGCGGTGATTTCCACGGCACAGGCGGACATTGCGACAACTCAAGCAGGCATTGCCACCACAAAGGCGGGCGCGGCGTCAACAAGCGCGGCCAATGCGGCACTGTTCGACGGGCCACGGTTCGCCACAATCGCCGAAGCGGCGGCTCATACGGGTTACACAGACGGCGGGTTTGCGATCATCAACCCGACTGGCGAGACATTCCAATACGACGCAGCCAGCACGGCAACCGCAGACGGGGCGCTGATCGTTGACGCAACGGGTATGGGCGTGGGGCGACTGATTAGCAAGCGGACGGTATTCGCCAGCTTCGCACAATTCATCGCGGACGCGCGCACGTTCACAGCCGGAACAACGCTGACCATTCCATCCATCGGCGCGGTGTATCAATCAACGGCGGGCGCGGGCCATGTGACCAACGCGGGTGGGCAGGCCTTTGATGTGCTGCCCAATGAAGCGGGTTTTAACGCCCAAGCGTTTGGGGCGCTTGGCGACTGGGACGGTACAGGCACCGACGACCGCGATGCAATACAATCTGCATTTGATGCGGCTAATGGTGTGTCTGTCATTTTTCCCAAGACAGACGCGGCGTATTACATCGCAACGCCGTTGACGATGGCAAATGGCGCGACATGGAAGGCACGGAGCAACGGGGCGAAGCTGACAGCCGCCACAGACATGTTTGATAACTTCGGCGCATCGGTTGATTTTGAAGGCCTGGAGCTTGACGGCGGCGTTGACTGCTTCGATTTCAAAGCAGCCACAGCCATTTCGGCGATTGATTTTCGCCTGGCTGGTTGCGGTGTCAAGAACTTCACGGGGCCAGCAATTCGTTCAAGCACTGCGCAGACGTTCGCCGTTCAGTTTGATAGCTTTATCCTTGACGACTGCACGTTCCAAGGGAACCGGATTGATGCCCTAGTCCAGCAGTACGATTTGAAGCTGGTTAAAGTCAGGGGCAATAGCTTCCTTGATGGCGGCGAAGAATCCTTGAACCTTCAAGGCGGGCCAAATCAAGGCGCTGATTACGTTATCACCGGAAACGTATTCCGCAACTACACCAACAATTTGCTTGGCCCTGATGCTGATGGCCATTTCATCCGGTGTTACGGTGAACGGGCTGTGATTGATGGGAACGTTTTTGATACCCTGAACATCGGGCCTAGCACCGTTGGCGGAGACACAGAAGGTTTGCGCCCGAACTGTGATCAGGTCGTAATCACAAACAACGTGTTCCGCGATGCGGGCATGGCAGAAGCCGTTGTCACTTTGAAAAACTGCCGCGAGTCATTGGTCCAAGGAAACTCTTTTGAATGCTCCGATGCGTATAATGCAGCGGCGATTGCCAGCGGGTTTTATACGGTAGGCGTTTTGGCAGATTACAACGCGCAGATCATTGGTAATACGTTCAACAACTTTAACGGTGCGATTGTCGATGTGCAGGATGGCAACCCCAACCTTGGGACTATTGTTATTGAGGGGAATTTAATAATTGACTCCCTGTGCAACCAGTTCTCAAGCTCTCAATTGTTCCGGCTCACCGCCCCAAGTACGGTTTACGTGGTCAGGAACAACACGGTGAAAACCAGCGAAGCTGTTGATGTTTTGCCGCTAAACATATTCCGCGTATCTAGCGGGGCTTCTGAATATTACGTTGAGGGTAACATCTTCAAAATGACCGGAACAGTTTTTGAAAATGTTAACGGGAACTCAAAAATCTACACAAAAAACAACACCTATAAAAACGGCACAAGGATCATTGCCGCCGGAACGTGTGGCAAGTTTCGGAGCAAGAATGACACATGGCAGCACGACACAGGGCCAGCGTTCACTAGTTTCTTCGGGTCAGGTGATGTGCCGCATAAAGACTTTATCGTTGACAATATGGGGATTGATATGACCCCAAGTGATTACAGGTTCATCGGGATCAAAACCACTGGCGATTGTGTTGGTTATGTTAATGCGGAATTGAGTTGGCGCGATGTTGGCGATGCTGCGACTGCGGTTGATCAGTCAAAAAGTTTCATCCGGTCAACTACTGGCGTTATGTCAATTGATGCAACGCCCACTGCGAACTTTTATGCAATTGGTACCCCGACAGGGACAGCCGCCGTGCCTGCGGTTATCAGTGGGTTTGTTTGCATACGCAGGCCGACAAATTTTCTCAGCGGTTCTAAGGTCCGTGGTAAGATCAGCATTGGGGTTGAACGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f418855a3140c89ee828e484bc18c2602ca4525b95abb871cb0f1cad7e5cf20
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2900
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Sulfitobacter phage phiGT1, isolated from a tidal flat Hwang,C.Y., Cho,Y., Jang,G.I., Cho,B.C. and Hardies,S.C. 2020-08-13 — GenBank