Protein

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Genbank accession
YAA53585.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNAHTPFDANQDWTNPYCQNTSNDPMVDALLGNAYHVVRTVYCNLGNLKLIYDFLNKYGMVLGVQSEAELKAMPTSASYVRLYGFDNTNKRVVTDYLYVDGDRTGVIPDDSSATGSWILVATSNSDSGGDGGDDKASTPYIPYTYNNGSAIGGETTIPVPVGTVGVPMIVVDGYTNLVGYGFTYDAASLTVTLAQPLEPGDEVHLFLTGTPAVPDNPNVNDWVQINWLYNGGYASGGEQVIAVPYTFESVPAIYKNGERYYAGLVDKSYTVDAANQRILLTEPLATNDRLIVTIGGESTTLVMSDRTIQEIARSANVHENEVILSTNTTQYLNGMKVIYDVVAQKIYGLPALPANVYINTVSNGQLTYSPGNITVTLPDTYQQQDTRELWRRSLAEAGLTLVDGSFEEGATVNSKTDAVWHISGGQCYVWNDTFPKTVPAKSTPASTGGIAAVAWSSVYQKGLRQLLSSDEGFDTVSGKIDLPGAVNQSLKKAISVSVNIISFGADPTGITDSSDAIQAAIDAVYALGGGEVFIPKSTGSAGNQGIGYLVTKSIMLKPFVNLRGEGINSCLKTYTDLGKGLLVLMHGGGISGRYLYNFRLQGNGTGIGIGTDIESTAEAEQQIYGFDIQGVCAEVFEIGMQLQGLWHSTLRNCTTSSCRMGLHLWGQNVSINITGCHFRRDHYSTLGNTFGIRIQPRVYAWSPDQSSGSRSEAIVIDGETMCISVDYGIYVDDCLDLQMSNLDLDYIRKNAVAIINVNGGFNLSDSWIAGDGESTEQFFAVSLNANQIQQQKSITGLHCNLHNANPLNNNIGINIAGQHVGPVYIGQSTFVGGWSGIAIFNHTGGGIVIDSCTLANPLYLTGSSDVVVQNSGLTGIEEILKPSNSYNYYRSNRGTPATNGVVSVPVAIGATSGTLTIPNADTTKSYRVRSWVVDPATANDTASCSAGVITVNRPVAVGVPLPSTVEYTLL
Physico‐chemical
properties
protein length:970 AA
molecular weight: 103750,79000 Da
isoelectric point:4,73005
aromaticity:0,08660
hydropathy:-0,07567

Domains

Domains [InterPro]
DC_0041
STR
13–224
DC_0041 G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334
G3DSA:3.30.2020.50
ATT
298–380
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050 IPR049104
IPR040775
RBD
403–458
IPR040775 IPR024535
YAA53585.1
1 970
Architecture
STR
ATT
ATT
STR
STR 13-224 | ATT 295-380 | ATT 399-458 | STR 459-970
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAA53585.1
1 970
Domain Start End Length (AA) Confidence
N-terminal 1 512 512 0,9962
Central domain 513 890 379 0,9895
C-terminal 891 970 79 0,9680
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-512
Central
513-890
C-terminal
891-970

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage N4Sz33
[NCBI] 		3446682 Viruses > unclassified bacterial viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAA53585.1 [NCBI]
Genbank nucleotide accession
PV805638.1 [NCBI]
CDS location
range 62752 -> 65664
strand -
CDS
ATGAACGCACATACCCCCTTTGATGCAAATCAGGATTGGACCAATCCTTACTGCCAGAATACTTCTAATGATCCAATGGTAGATGCACTACTTGGTAATGCTTATCATGTGGTTCGTACTGTCTACTGTAACTTGGGTAACCTGAAACTCATTTACGATTTCTTGAATAAATATGGAATGGTACTAGGTGTTCAATCAGAAGCTGAACTGAAGGCCATGCCTACCAGTGCATCCTATGTACGTCTGTATGGTTTTGATAATACCAATAAACGAGTTGTTACAGATTACCTGTATGTAGATGGTGACCGTACAGGTGTCATTCCTGATGACTCGTCTGCTACTGGTTCCTGGATTTTGGTTGCCACTTCTAATTCAGACAGTGGCGGAGATGGTGGTGATGATAAAGCATCCACTCCATACATCCCATATACGTATAATAATGGTTCTGCTATTGGGGGGGAAACTACTATCCCAGTGCCTGTTGGTACGGTTGGTGTACCGATGATTGTTGTTGATGGCTATACCAACTTAGTTGGTTATGGTTTTACTTACGATGCAGCTTCACTAACTGTTACTCTGGCTCAACCATTGGAACCTGGTGATGAAGTACATCTGTTCCTTACCGGTACTCCTGCTGTTCCAGATAACCCTAACGTAAATGACTGGGTTCAGATTAACTGGCTATACAACGGTGGGTATGCTTCGGGGGGTGAGCAAGTAATTGCTGTTCCGTATACGTTTGAATCTGTGCCAGCCATCTACAAGAATGGCGAACGCTACTATGCAGGTTTGGTTGATAAATCCTATACAGTCGATGCAGCTAACCAGCGTATCCTTTTAACGGAGCCTCTGGCTACCAACGATCGTTTGATTGTAACTATTGGTGGTGAGTCTACTACCCTGGTTATGTCTGACCGTACCATTCAGGAAATAGCTCGTTCTGCTAATGTTCATGAGAATGAAGTTATCTTGAGTACTAATACTACCCAGTATCTAAATGGGATGAAGGTTATTTATGATGTAGTAGCACAAAAGATTTATGGTCTTCCTGCTCTTCCTGCTAATGTTTATATCAACACTGTTTCCAATGGGCAGTTAACTTATTCTCCTGGGAATATTACTGTTACTCTGCCAGATACCTACCAACAACAGGATACCAGAGAACTATGGCGTCGCAGTCTTGCTGAGGCCGGTTTAACTCTTGTTGATGGTAGCTTTGAAGAAGGTGCAACAGTAAATAGTAAAACGGATGCGGTTTGGCATATTTCTGGTGGACAGTGTTATGTGTGGAATGACACTTTCCCGAAAACTGTTCCGGCTAAATCAACTCCGGCATCTACAGGTGGTATTGCAGCCGTTGCGTGGTCATCCGTATACCAAAAAGGACTGCGACAGCTCCTTAGCAGTGATGAAGGGTTTGATACCGTTTCCGGTAAAATCGATTTACCTGGGGCTGTTAATCAGTCGTTAAAAAAAGCTATTTCTGTAAGCGTAAATATTATTAGTTTTGGTGCAGACCCAACTGGCATTACGGACAGTTCCGACGCAATACAGGCGGCTATTGATGCTGTTTATGCACTTGGGGGTGGTGAGGTATTTATACCTAAATCTACCGGAAGTGCAGGTAATCAGGGCATAGGCTACCTGGTAACAAAATCTATAATGCTCAAGCCATTTGTTAATCTAAGAGGCGAGGGTATTAACTCGTGTCTTAAAACCTACACTGATCTCGGTAAAGGTCTGTTAGTTTTGATGCATGGAGGCGGGATATCTGGCCGTTATTTATACAATTTCCGCTTGCAGGGGAATGGCACTGGCATAGGGATTGGTACAGATATTGAATCCACTGCCGAGGCAGAACAGCAAATTTACGGTTTCGATATCCAGGGTGTTTGTGCTGAGGTGTTTGAAATAGGAATGCAACTACAGGGGTTGTGGCATTCTACGTTGCGTAACTGCACTACTAGTAGCTGCCGTATGGGGTTACATCTATGGGGGCAAAACGTTTCTATCAATATCACGGGATGCCATTTCCGCCGTGATCATTATTCTACATTGGGTAACACGTTTGGCATTCGCATCCAGCCTAGGGTGTATGCGTGGAGTCCTGACCAGAGTTCAGGATCTCGTAGTGAAGCCATCGTTATTGATGGGGAAACTATGTGTATTTCCGTAGATTATGGCATCTATGTTGATGACTGCCTGGACTTGCAGATGAGTAATCTGGATTTGGATTACATTCGAAAGAATGCCGTGGCTATTATTAACGTTAACGGTGGATTTAACCTGTCAGATTCATGGATAGCTGGCGATGGTGAGTCCACAGAGCAATTTTTTGCAGTCTCTTTAAACGCTAACCAAATCCAACAACAGAAATCGATTACTGGTTTGCACTGTAATTTGCATAATGCCAACCCTCTCAATAATAACATTGGTATTAACATTGCTGGCCAACATGTTGGGCCTGTATACATCGGCCAGTCTACGTTTGTCGGTGGGTGGTCGGGTATAGCAATTTTTAACCATACTGGTGGGGGTATTGTTATTGATTCATGTACTTTGGCAAATCCGTTGTACCTAACTGGTTCTAGTGATGTTGTAGTGCAAAATTCCGGATTAACTGGTATTGAGGAAATATTGAAGCCTTCCAATTCTTATAATTACTATCGTTCTAATAGAGGCACACCTGCTACCAATGGGGTAGTAAGTGTTCCTGTTGCTATTGGGGCCACTTCTGGAACATTAACTATACCTAATGCAGACACAACTAAGTCGTATAGAGTTCGCTCATGGGTAGTTGACCCAGCTACTGCAAACGATACTGCTTCTTGCTCTGCTGGTGTAATTACAGTAAACAGACCTGTAGCAGTAGGTGTCCCCCTTCCATCTACAGTGGAATACACACTGCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b0a073eac81f327ad633da9e2df65b8880ddc7cc3456ce494247a2addb43ea44
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8177
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50