Protein

View in Explore
Genbank accession
QBX27750.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,66
Protein sequence
MQITFYDKNMFETAVADNALLNAIKIKKASLTSLFEEATHQVEFEFSKELGEWWSIKENGYLAFKFRGRFFRFSIVKFKENAKNKTIEIVGDYFNLEMLNENCSTYEKQPARTIVQHFTAMEILPYANFEIGVNELASNTRTLTYTGDEVKYKRLISIINNFGGECEFEIRQKANGQFDKLVLNIYRANDGINYQGVGRNRRDFEITIDNSNDVSRTVDSTAIKTSIEPIGRDGLRIGNRGTIWKNSEGKVEFYQKNNRIYAPLAAEEMPRVLESDKFLLWKLQVDTDTIPKLEAEGLKWLRNVCYAKEIIEVSGSFDVEVGDTVILNHKGIGRYGVLGSLRVMKVTWDLLTETSEVTFANFKRLASKISAQGLALQNSIESPASYDITFNTTAGTVFKNNTGSSNVSFNFSKNGAQTAVLGQRWYKGTQLLSNGLEVMIKPNMLTEGKLNLRLEVDVTSAITFSKELTFINVNDGVNGSDGRGITSTEDYYMVSANKTDITSATPGWIKDIPQIATPANKYHWHYHVDVYTDGTRKETVPAIIGIYGSKGSDGATSWTAWANSKDGKVDFSITEAENRRFIGTYTGLTQSTNYLDYKWIDMSANVVIGTQNLFDGTKSFSGSWFTEGTIFETTKISEYPFEFKKWKSGNKVSHTIEFDVKAGVTYTFTAAIARENAGRLYFYLYDLFANHITSNTPRETIIENVTTDIQMFKVTFVPLRDGKIKPRFAMLASDAGWFMTGGYMLVKGNKSGDWQESEVDRINNLDTKADQELTRAQILALEERTAIARENAIAEAMQNTLSEVETKWKLWYDLNTIDEKQKVANDIAQLFDRTTEFKQLLGEASAKFSFINNETLIGEEGIAIGDKDGKAKLFLSNDSISFVTNGVAQMTLTGDTLTIKNGLFTERIQIGNFVEEVYDRNPLFNVIRAIRNS
Physico‐chemical
properties
protein length:933 AA
molecular weight: 105237,36950 Da
isoelectric point:5,57337
aromaticity:0,11147
hydropathy:-0,35863

Domains

Domains [InterPro]
DC_0921
STR
69–933
DC_0921
Coil
Unmapped
787–807
Coil
QBX27750.1
1 933
Architecture
STR
STR 69-933
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan42
[NCBI] 		2548156 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus agalactiae
[NCBI] 		1311 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27750.1 [NCBI]
Genbank nucleotide accession
MK448932.1 [NCBI]
CDS location
range 28483 -> 31284
strand +
CDS
GTGCAGATTACATTTTATGACAAAAATATGTTTGAAACTGCGGTTGCAGACAATGCATTGTTAAATGCTATTAAAATAAAAAAAGCATCCCTAACCTCATTATTTGAGGAGGCAACTCACCAAGTTGAATTTGAATTTTCAAAAGAACTTGGTGAGTGGTGGAGCATTAAAGAAAATGGTTATCTAGCTTTTAAATTTAGAGGAAGATTTTTTAGGTTTTCGATTGTTAAGTTCAAAGAGAACGCTAAAAATAAGACAATTGAAATTGTTGGTGACTATTTTAATTTGGAGATGTTAAATGAAAATTGCTCTACTTATGAGAAACAACCAGCTAGAACAATTGTGCAACACTTTACCGCGATGGAGATTTTGCCTTATGCCAATTTTGAAATTGGAGTAAATGAACTGGCAAGTAACACAAGAACTTTGACATATACAGGTGATGAGGTCAAATATAAAAGGCTCATATCGATTATTAATAACTTTGGTGGCGAATGTGAGTTTGAAATTAGGCAGAAAGCAAATGGTCAATTTGACAAGCTTGTGCTCAATATTTATAGAGCAAATGATGGTATTAATTACCAAGGTGTTGGACGAAATAGACGAGATTTTGAAATAACTATTGACAATTCAAATGATGTTAGCCGAACAGTTGACTCAACAGCAATCAAGACATCAATAGAGCCTATTGGAAGGGATGGTTTAAGAATTGGTAATAGAGGTACAATTTGGAAGAATAGTGAAGGGAAAGTTGAATTTTATCAAAAAAATAATAGAATTTATGCCCCACTGGCTGCCGAAGAAATGCCAAGGGTTTTAGAGTCTGATAAGTTTTTACTTTGGAAATTACAAGTTGATACTGATACTATACCAAAACTAGAAGCCGAGGGGCTAAAATGGCTCAGAAATGTTTGTTATGCAAAAGAAATCATTGAAGTCTCAGGCTCATTTGATGTAGAAGTTGGCGATACAGTCATACTTAATCACAAAGGTATAGGAAGATACGGCGTGTTGGGTTCACTTAGAGTTATGAAAGTTACTTGGGATTTACTAACAGAAACAAGCGAAGTAACATTTGCTAACTTTAAACGTTTAGCATCTAAGATTTCTGCTCAGGGTCTAGCTTTGCAAAATAGCATCGAAAGTCCAGCGAGCTATGATATTACATTTAACACAACAGCTGGAACTGTGTTTAAAAATAATACAGGCTCATCAAATGTATCGTTTAATTTCAGCAAAAATGGAGCCCAGACGGCCGTTTTAGGTCAAAGATGGTATAAAGGAACCCAACTGTTATCAAATGGCTTAGAAGTGATGATAAAGCCTAATATGCTTACTGAGGGAAAACTCAATTTGAGGCTTGAGGTTGATGTCACATCTGCAATTACATTTAGCAAAGAATTAACTTTTATCAATGTAAATGATGGTGTTAATGGCTCTGACGGTCGTGGTATCACATCGACAGAAGATTATTACATGGTTTCAGCTAACAAGACGGATATCACATCTGCAACACCTGGATGGATTAAAGATATACCTCAAATTGCAACTCCTGCAAATAAATATCATTGGCACTATCATGTTGATGTTTATACAGATGGAACAAGAAAAGAAACAGTACCAGCAATTATTGGTATTTATGGTTCAAAGGGTTCTGATGGTGCTACATCATGGACAGCGTGGGCCAATTCGAAAGATGGAAAAGTTGACTTTAGTATTACTGAAGCTGAAAATAGAAGATTTATTGGTACTTATACTGGATTAACGCAATCAACAAATTATCTTGACTACAAGTGGATTGATATGTCTGCTAATGTTGTCATTGGTACTCAAAATTTATTTGATGGTACAAAATCATTTTCTGGAAGTTGGTTTACCGAAGGTACAATATTTGAGACTACAAAAATCAGCGAATATCCATTTGAATTTAAGAAATGGAAGTCTGGAAATAAGGTTAGTCACACTATCGAGTTTGATGTTAAAGCTGGTGTAACATACACTTTTACAGCTGCTATAGCAAGAGAAAATGCTGGAAGATTGTACTTCTATTTGTATGACTTGTTTGCAAACCATATCACAAGTAACACACCTCGTGAGACGATAATTGAAAATGTCACTACAGATATCCAGATGTTTAAAGTTACATTTGTACCGCTCAGAGACGGTAAAATAAAACCACGCTTTGCCATGCTTGCCAGTGATGCAGGTTGGTTTATGACTGGTGGATATATGCTTGTCAAAGGTAATAAATCTGGAGATTGGCAAGAGTCCGAAGTTGATAGAATAAACAATCTCGACACAAAAGCTGACCAAGAATTAACCCGAGCACAAATTCTAGCTCTTGAAGAAAGAACGGCTATAGCAAGAGAAAATGCAATTGCTGAGGCTATGCAGAATACACTCAGTGAAGTTGAAACTAAGTGGAAGCTTTGGTATGACTTAAATACGATAGACGAAAAGCAAAAAGTTGCAAACGACATCGCTCAATTGTTTGATCGTACAACTGAGTTTAAACAACTTTTAGGTGAGGCAAGTGCAAAATTTAGCTTTATCAACAACGAGACATTGATTGGTGAAGAGGGGATTGCCATTGGTGACAAAGATGGCAAAGCTAAGTTATTCCTATCAAATGACAGCATCTCCTTTGTTACTAATGGTGTTGCTCAAATGACACTAACAGGTGATACATTAACGATAAAGAATGGTCTGTTTACAGAGCGTATACAGATTGGAAATTTTGTTGAAGAAGTCTATGACAGAAATCCATTATTTAATGTAATCAGAGCGATTAGGAATAGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b5165f098db8017cef6d34d0fc24315c8f823d0e01dae7f09ca35be3e4b99e68
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7856
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank