Protein

View in Explore
UniProt accession
A0A8S5SRQ0 [UniProt]
Protein name
Nucleoid-associated protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MADTYTIQFRRGMYADFDTSKIRPGEPVAILGNDPSVPSGKALYIAFAANDVRRLCSIEDISEMVNAGEFVGPQGPKGEKGDKGDPGERGADGTVAFESLTPEQKESLRGISIKSASVDTDGNLTITFSDGDSEDVGNIMGPQGIQGSKGDKGVGIKKITDYYALSSSNTDKAFGQVWLTTPPTMTAEKKYLWHWQRTDYTDDSFYSTEKGVIGVYGEQGLKGDKGDKGPKGDNMSDEQAAQIEQNKTDIASLKEDISNKITKFYASSQGKPHLADSD
Physico‐chemical
properties
protein length:278 AA
molecular weight: 29966,70440 Da
isoelectric point:4,76512
aromaticity:0,07914
hydropathy:-0,70288

Domains

Domains [InterPro]
G3DSA:1.20.5.320
STR
70–126
G3DSA:1.20.5.320
IPR050149
Unmapped
72–233
IPR050149
DC_1328
STR
94–277
DC_1328
A0A8S5SRQ0
1 278
Architecture
STR
STR 70-277 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ct1gv6
[NCBI] 		2827766 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF53499.1 [NCBI]
Genbank nucleotide accession
BK032655 [NCBI]
CDS location
range 1 -> 835
strand -
CDS
ATGGCCGATACATATACAATACAATTCCGGCGCGGTATGTACGCCGATTTTGATACGTCGAAAATTCGCCCCGGAGAGCCTGTTGCGATTCTTGGCAATGACCCGTCCGTTCCATCTGGCAAAGCCTTATACATTGCATTTGCGGCTAATGATGTAAGGCGGTTGTGCTCCATTGAGGATATTTCAGAGATGGTTAATGCCGGAGAATTTGTTGGTCCGCAGGGTCCCAAAGGTGAAAAAGGAGATAAGGGCGATCCGGGAGAAAGGGGCGCGGATGGCACCGTAGCATTTGAATCGCTGACACCTGAGCAGAAAGAATCACTAAGAGGAATATCTATTAAGTCAGCTTCTGTTGACACAGACGGAAATCTGACAATAACGTTTTCAGATGGAGACAGTGAAGACGTTGGTAATATTATGGGACCGCAGGGAATTCAGGGTTCAAAAGGTGATAAAGGGGTAGGTATTAAAAAGATAACAGATTATTATGCTTTGTCATCATCTAATACAGATAAGGCTTTTGGACAGGTGTGGCTTACAACTCCGCCGACTATGACAGCGGAAAAGAAATATCTTTGGCATTGGCAGAGAACTGATTACACTGATGACAGTTTTTATTCAACAGAAAAAGGTGTAATAGGCGTATATGGAGAACAGGGACTCAAAGGTGATAAAGGCGATAAAGGGCCAAAAGGTGACAATATGAGTGACGAACAGGCCGCACAGATTGAGCAGAACAAGACAGACATTGCTTCGCTAAAGGAAGATATATCCAACAAAATTACAAAATTCTACGCCAGTTCGCAAGGTAAACCCCATCTTGCTGATTCTGACA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
bdfec0d8f00eed4ccfacf1e50bb8a7152a0ec7c141c4ce3d7c2a24a6f37f7150
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8095
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50