Protein

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Genbank accession
YP_010113512.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,74
Protein sequence
MKKLKIVQNNVQEKTKDSVVEKLYALTKSDDTTPAIAESAELEGNVRVNAAYEDSVTYLRNKFPNLTIDVTDNNYYIRFADKEVERVLLENGVGNGVGITKTDARRTNVNKWFFNNKTITSFDEFEWFDNENINREAFLGCTYLRSIYLTNAKIIQTKAFVWCSNLSGTLSLPNLTSDLGEAAFRETGILKIENLNGTNLTNWGTFYRCPNLTEANLGDTISIIGSNTFFECSSLATVNLPETIIKIGDSAFKSTKINNDINLPNLVSLGAGAFENTLVKNVINIGTITEYNNCFGNTPITKLTLPETVTRIERIDNSQLTQLNFVPENITYLGHVAIKAPAAKLDVLNFCNVTTAVQKLFNITVNQCYMPKITKGVESGYYGNNTYNTPFFSLDRIKNSFTCGLLYLKDISILYPATFTNSKITNLVINNETPPEWRNTNNLSDDQANNEQKKSLVFIYSDVLNIYVPDAAVTTYQQDENWLSVADKIKPLSELPSVNTKTEYDQLSDVNKLNTIIKEYM
Physico‐chemical
properties
protein length:521 AA
molecular weight: 58536,36320 Da
isoelectric point:5,09234
aromaticity:0,09789
hydropathy:-0,28484

Domains

Domains [InterPro]
IPR032675
STR
53–260
IPR032675 IPR032675
IPR032675
STR
55–260
IPR032675
IPR053139
Unmapped
114–408
IPR053139
SSF52058
STR
129–286
SSF52058
IPR026906
STR
131–187
IPR026906 IPR026906
YP_010113512.1
1 521
Architecture
STR
STR 53-492 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010113512.1
1 521
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,9148
Central domain 50 441 393 0,9332
C-terminal 442 521 79 0,5466
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-441
C-terminal
442-521

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr273_1
[NCBI] 		2772095 Uroviricota > Caudoviricetes > Crassvirales > Oafivirinae > Buhlduvirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010113512.1 [NCBI]
Genbank nucleotide accession
NC_055904 [NCBI]
CDS location
range 13267 -> 14832
strand -
CDS
ATGAAAAAACTAAAAATAGTACAAAACAACGTACAAGAAAAGACAAAAGATTCTGTAGTAGAAAAACTTTACGCTTTGACAAAGAGTGACGATACGACTCCGGCTATTGCAGAATCTGCCGAGTTGGAGGGTAATGTTAGAGTTAATGCTGCGTATGAAGATTCTGTTACTTATCTGAGAAACAAATTTCCAAATCTTACCATCGATGTTACAGATAATAACTATTATATTCGTTTTGCTGATAAAGAGGTAGAACGAGTGTTATTAGAAAACGGTGTAGGAAATGGCGTAGGTATTACAAAAACAGACGCTAGAAGAACAAATGTAAACAAATGGTTTTTCAACAACAAAACAATAACTTCATTTGACGAGTTTGAATGGTTTGATAATGAAAATATCAATCGCGAAGCATTTCTTGGCTGTACATATCTAAGAAGTATATATCTTACAAACGCCAAAATAATACAAACTAAAGCGTTTGTGTGGTGTTCTAATTTGTCTGGCACACTATCTTTACCAAACCTTACGTCTGACTTAGGAGAGGCTGCGTTTCGTGAAACAGGTATATAGAAAATAGAAAACCTAAACGGAACAAACTTAACAAATTGGGGAACGTTTTACAGATGTCCGAACCTTACGGAGGCTAACCTTGGAGATACAATATCGATAATAGGATCCAATACATTTTTTGAATGCAGTAGCTTAGCTACTGTAAACCTTCCAGAAACAATCATAAAAATTGGAGATTCCGCATTTAAATCGACTAAAATAAATAATGATATAAATTTACCAAATTTAGTTAGTTTAGGAGCTGGTGCATTTGAAAACACCCTCGTTAAAAACGTTATAAATATTGGCACAATAACAGAGTACAACAATTGTTTTGGAAATACTCCAATTACAAAGCTAACTCTCCCAGAAACAGTTACTAGAATAGAAAGAATAGATAATTCGCAGTTAACGCAACTTAATTTCGTACCAGAGAACATTACATATTTGGGCCACGTTGCAATAAAAGCCCCTGCAGCAAAATTAGACGTATTAAATTTTTGCAACGTTACTACAGCTGTACAAAAACTGTTTAATATTACAGTAAACCAATGTTATATGCCGAAAATAACAAAAGGCGTAGAAAGCGGTTATTATGGTAACAATACATATAACACTCCATTTTTTTCGCTAGACAGAATTAAAAATTCGTTTACGTGTGGATTATTATATTTAAAAGATATATCGATATTATATCCTGCTACATTTACAAACAGTAAAATTACAAACTTAGTAATAAATAATGAAACTCCACCAGAGTGGAGGAATACGAATAATTTGTCAGATGATCAAGCGAATAACGAACAAAAGAAAAGTTTGGTATTTATTTATAGTGATGTATAGAATATATATGTTCCGGACGCTGCGGTAACTACATATCAACAAGATGAAAATTGGTAGTCTGTTGCAGATAAGATCAAACCATTGAGCGAATTACCAAGCGTAAATACCAAAACAGAGTATGATCAACTGAGTGATGTTAATAAGCTGAATACGATTATTAAAGAATACATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
639b78a8b262361f9f0eb7df94939bf80cde00be52b4b390ec16cd629128bdb0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7922
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank