Protein

Genbank accession
AJD82060.1 [GenBank]
Protein name
long tail fiber distal subunit
RBP type
TF
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MADLSRIKFKRSSVAGKRPLPADIAEGELAINLKDCMLFTKDDQNMIVDLGFAKGGNVDGNINQVSGNFKTAGNVEGKNFDITDSAKINNSTKTKYLTISTNDEPTSNGIYRYWGSATRGSVHEFGFADSSYGMYVQKSPTGDVDAAINGKLSIGTAGNAILNIGGLDDGDTGFTSGGDGLLHVRANNEYVMQFQSSVATVHKILRPNAGIETSYKGYGTYDFISLAQWADTPETANGVNHLRKMRGCAAGTIFHELVDQKNSEIAWYQGNGPEIKIVSWNSDGDLKANGSITALNGSFFSRASNAAYNANYWFHGESGQERAVIYAGANGQLRLRNQATGSGEMVFDGGMIQTLTMVSGSERALIRGTVDGGSHVAWRDRSSGIQLDCPNSDNVAYNIWKATKWGANHLAAMDVHAPAGDPNNVVIRLLSGNHVHNWNGPNYSSPGTIAAGGRLSTGAGVYAAGRVEGHDLVSRGEIYGAGGNVTIDTSGNILASAWETGNLKHELNTIRTAANNAQSTANTANATANNAQSTANTANANANAAARWVNWGTSYNFGLLNQTPNQRIIDKGWFLVGLAGAGQNNNTINLIGGRIQVWNNNSGWVDSST
Physico‐chemical
properties
protein length:609 AA
molecular weight: 64682,50020 Da
isoelectric point:6,36207
aromaticity:0,08210
hydropathy:-0,38949

Domains

Domains [InterPro]
IPR021793
501–547
IPR021793
AJD82060.1
1 609
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenM_TG1
[NCBI] 		1589265 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Yersinia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJD82060.1 [NCBI]
Genbank nucleotide accession
KP202158 [NCBI]
CDS location
range 153635 -> 155464
strand +
CDS
ATGGCCGATTTATCAAGAATTAAATTTAAACGCTCTTCTGTCGCAGGTAAACGTCCACTACCTGCCGATATCGCTGAAGGCGAATTAGCGATTAACTTAAAAGATTGTATGCTCTTTACAAAAGATGACCAGAACATGATTGTCGATTTAGGCTTTGCTAAAGGTGGCAATGTCGATGGCAATATTAACCAAGTTTCTGGTAACTTTAAAACAGCAGGTAATGTTGAAGGTAAAAACTTTGATATCACTGATTCTGCTAAAATTAATAACAGCACAAAAACTAAATATCTTACTATTTCTACAAATGATGAGCCTACTTCAAACGGAATATATCGTTATTGGGGTTCAGCTACTCGTGGTTCTGTTCATGAATTCGGCTTCGCAGATTCATCTTATGGGATGTATGTCCAGAAGTCTCCTACAGGTGATGTAGATGCCGCTATAAACGGTAAACTCTCTATTGGTACAGCTGGTAATGCTATTTTAAATATTGGCGGGCTGGATGATGGTGACACTGGTTTCACTTCAGGCGGTGATGGTCTCTTACATGTAAGAGCCAATAACGAATATGTTATGCAATTTCAATCTAGTGTTGCTACAGTTCATAAAATACTCAGACCAAATGCTGGCATCGAAACATCGTATAAAGGCTACGGTACTTATGATTTTATTAGCTTAGCTCAATGGGCTGATACACCTGAAACTGCTAATGGTGTGAACCATCTACGTAAAATGCGTGGTTGTGCTGCGGGCACTATATTTCATGAATTGGTTGATCAGAAAAATAGCGAAATTGCGTGGTATCAAGGCAACGGGCCAGAAATAAAAATTGTGTCGTGGAACTCTGACGGCGATCTGAAAGCTAATGGTTCTATTACTGCTTTAAATGGTTCATTTTTTAGCAGGGCTAGTAATGCTGCATACAATGCTAACTATTGGTTCCATGGTGAATCAGGTCAAGAACGCGCAGTAATTTATGCAGGTGCTAATGGACAGTTGAGACTAAGAAACCAGGCCACGGGTTCAGGTGAAATGGTGTTTGATGGTGGTATGATTCAAACATTAACTATGGTAAGCGGTTCTGAACGTGCTCTCATTCGTGGTACTGTTGATGGCGGTTCTCATGTAGCGTGGCGAGATCGTTCTTCAGGTATTCAATTAGATTGTCCTAATTCTGATAATGTTGCTTATAACATTTGGAAAGCTACTAAATGGGGTGCAAACCATTTAGCTGCTATGGATGTCCACGCTCCTGCCGGTGATCCGAATAACGTTGTTATTCGTTTATTATCAGGCAACCATGTACATAATTGGAATGGTCCTAACTATAGTTCACCAGGAACTATAGCAGCTGGTGGCAGACTATCTACCGGAGCAGGCGTTTATGCTGCGGGTCGAGTCGAAGGTCATGACTTGGTATCTCGTGGAGAAATTTACGGGGCTGGCGGTAACGTTACGATTGATACTTCTGGTAACATTTTAGCTTCTGCTTGGGAAACAGGTAATCTGAAACACGAGTTGAATACTATCAGGACTGCTGCTAATAATGCGCAAAGTACGGCGAACACGGCTAACGCAACTGCTAATAATGCGCAAAGTACGGCGAACACGGCTAACGCAAATGCTAATGCTGCTGCTCGTTGGGTGAATTGGGGTACATCATATAACTTTGGGCTGTTGAACCAGACTCCAAACCAACGTATCATTGATAAAGGGTGGTTCTTGGTTGGTCTAGCGGGAGCCGGACAAAATAATAACACTATAAACCTTATCGGTGGTCGTATTCAGGTTTGGAATAATAACAGTGGTTGGGTTGATTCATCAACATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2a02ab08566db45822036ff218621cca373b504a894c3955b85e305871ce77ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6541
Evidence 0,6541
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of vB_YenM_TG1, a broad host range bacteriophage which infects Yersinia enterocolitica Leon-Velarde,C.G., Kropinski,A.M., Chen,S., Griffiths,M.W. and Odumeru,J.A. 2014-10-28 — GenBank