Protein

View in Explore
Genbank accession
YP_010684978.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,59
Protein sequence
MPVIHIQKMPGVPKETGNVPAGTNLWRWLENSGLPSDIRIALNGRIFGPDDELSISLKQNDIVNIYCQPRGAIGDLISTILKPVTKVLSFLLPKASTPSTSTGATVESPNNSLKSQTNIARNGEARPDNFGQIRAFPDLIQESLFEYIDDLKYVTEFMNFGLGKYTISSVRYAETNLGSLPGSSHVIYNPGDVIGQIIEPYQFDGLDGQEVPGLNESDATPVETATTTSVTSGEYAGGQLLVVIPKNSDFDYFMGLSLPHSVTLTINITYNSTSGPVTENIQLSGNIISAEEKQTGVIPDIQYFYNFTFNNLTGANLGNLSGATINNTYFQIVDNEALVVGPYVGAVESTQVWVHVQSELGPTSGTADYLIKVWAVDDNGDAIPGTEEQLADSIDNPFNQTTKTYYRTYKLTPAYGLAKYAISIERTNNSNSGNRVTLQAAHAINIRENVVYPDDTLVKVTVKATLQPTSVSERKYNALIERWTIGYNRSTSTVNYALSPSRSFADAVLHNWLITAGQPESTIDIARLYEIADSLPDARLGYFDYTFDDEDKSIGERIQTICDAARVTVFWDDGVLSFSRDEQKSTPETVFNTRNTQADGYKMSYDMTLPGSYDGVSVQYRDPNTNKQAYVYYKVGTSGIEPGEPAKPKKFDMLYVRNLYQATDRAMLECNRLMYSRRGMEIKALADGEWVNVGDMISVVDIYDSVQQTGVIRSRSGNVFTTSEQLTASSGLFVVITGANGNVSERLACTVTGLNTFECALPSDFELNIFDGVNVQSESRYAISTEVELDSTLWTVSQKTPGTDGTVSLTVTEYNDAMYAYTNPVA
Physico‐chemical
properties
protein length:826 AA
molecular weight: 90682,94560 Da
isoelectric point:4,57698
aromaticity:0,09443
hydropathy:-0,27470

Domains

Domains [InterPro]
DC_0118
STR
1–667
DC_0118 DC_0808
NF040662
Unmapped
348–820
NF040662
YP_010684978.1
1 826
Architecture
STR
RBD
STR 1-667 | RBD 684-825 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLCpiS13d
[NCBI] 		2874888 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010684978.1 [NCBI]
Genbank nucleotide accession
NC_071142 [NCBI]
CDS location
range 26872 -> 29352
strand +
CDS
ATGCCGGTTATTCACATTCAGAAAATGCCAGGAGTTCCAAAAGAGACGGGTAATGTTCCTGCTGGCACAAATCTGTGGAGATGGCTGGAGAATTCCGGCCTTCCATCTGACATCAGGATTGCGCTGAATGGCCGCATTTTTGGACCTGATGATGAATTGTCGATATCGTTAAAGCAGAATGATATTGTCAACATATATTGCCAGCCACGCGGTGCGATTGGCGACCTGATAAGCACCATCCTGAAGCCGGTAACAAAGGTTCTTTCATTCCTGCTGCCAAAGGCATCCACGCCATCAACCAGTACTGGCGCAACTGTAGAATCACCAAACAATAGCCTGAAGTCACAGACCAACATCGCGCGAAATGGTGAGGCAAGGCCAGATAACTTTGGTCAGATTCGCGCTTTCCCTGACCTCATTCAGGAATCTCTTTTTGAATATATCGACGACCTGAAATATGTTACTGAGTTCATGAATTTTGGCCTCGGAAAGTACACAATCTCATCTGTTCGTTATGCAGAAACAAACCTCGGCTCTCTGCCGGGGTCATCACATGTTATCTACAATCCCGGCGATGTCATAGGTCAGATAATTGAGCCTTATCAGTTTGACGGCCTTGATGGTCAGGAGGTTCCCGGACTCAACGAATCAGACGCGACGCCTGTAGAGACGGCAACGACCACATCCGTAACCAGTGGTGAATACGCTGGCGGCCAGCTGCTTGTTGTCATCCCAAAAAACAGCGATTTCGATTACTTTATGGGGCTTTCGTTGCCTCATTCAGTGACATTAACAATAAACATCACTTACAACTCCACATCCGGTCCGGTAACGGAAAACATCCAGCTCAGTGGAAACATAATTTCAGCTGAAGAAAAGCAGACTGGTGTTATCCCTGACATCCAGTATTTCTACAATTTCACTTTCAATAACCTGACTGGTGCGAATCTTGGAAATCTTAGCGGCGCTACCATCAATAATACCTATTTCCAGATTGTTGATAACGAGGCGCTGGTGGTTGGGCCATACGTCGGGGCGGTGGAGTCAACGCAGGTGTGGGTGCATGTTCAGTCTGAGCTCGGGCCGACCAGTGGCACTGCTGACTATCTGATCAAGGTGTGGGCTGTTGATGATAATGGTGATGCCATTCCTGGCACGGAGGAGCAGCTTGCAGACAGCATTGACAACCCATTCAACCAGACAACCAAGACATATTACCGGACATATAAATTAACCCCCGCTTATGGTCTGGCGAAATATGCGATCAGCATTGAGAGAACCAACAACTCAAACTCAGGAAACCGGGTGACATTGCAGGCAGCGCATGCCATCAACATTCGTGAAAATGTGGTTTATCCTGATGACACGCTTGTTAAGGTGACGGTAAAGGCGACGCTGCAACCCACCTCTGTTTCTGAGCGCAAATATAACGCACTCATTGAGCGCTGGACAATTGGTTATAACCGTTCAACGTCAACAGTAAACTATGCGCTGTCTCCATCGCGGAGTTTTGCTGATGCTGTGCTGCACAACTGGCTTATCACTGCCGGGCAGCCGGAGAGCACCATAGATATTGCAAGGCTCTATGAGATTGCAGACTCCTTGCCAGATGCACGTCTTGGGTATTTTGACTACACGTTTGATGATGAAGATAAATCTATCGGTGAGCGAATTCAGACCATCTGTGATGCTGCTCGCGTCACAGTATTCTGGGATGATGGGGTTCTGTCTTTCTCAAGGGATGAGCAAAAATCAACCCCTGAAACCGTGTTTAATACCAGAAACACGCAGGCCGACGGCTATAAAATGTCTTATGACATGACTTTGCCAGGGTCATATGATGGCGTGAGTGTCCAGTACCGCGACCCAAACACCAACAAACAGGCTTACGTTTATTATAAAGTTGGGACATCTGGTATTGAACCGGGAGAGCCAGCTAAGCCGAAAAAATTCGACATGCTATATGTTCGAAACCTGTACCAGGCAACAGACCGGGCCATGCTTGAGTGCAATCGCCTCATGTACTCGCGTCGTGGAATGGAGATAAAAGCGCTTGCTGATGGAGAGTGGGTAAACGTTGGCGATATGATTTCTGTTGTCGACATTTATGATTCAGTGCAGCAGACAGGCGTTATCCGTTCAAGATCTGGAAATGTATTTACCACCAGTGAACAACTCACAGCAAGCAGTGGCTTGTTTGTAGTTATCACTGGCGCCAATGGGAATGTGTCAGAACGTCTGGCTTGTACTGTTACTGGATTGAACACATTCGAATGCGCATTGCCATCTGACTTCGAGTTAAACATTTTTGATGGTGTTAATGTTCAGTCAGAATCAAGATATGCCATCTCAACAGAGGTTGAGCTTGACTCAACATTATGGACAGTTAGCCAGAAAACTCCAGGTACAGATGGCACAGTTTCTCTCACAGTAACTGAGTACAATGACGCCATGTACGCCTACACCAACCCTGTTGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ec9252f9f4383a2db2a17657820336a1f9cb74fe9ae7b71566a6dc72a52889b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3009
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic determinants of host tropism in Klebsiella phages Beamud,B., Garcia-Gonzalez,N., Gomez-Ortega,M., Gonzalez-Candelas,F., Domingo-Calap,P. and Sanjuan,R. — — GenBank