Protein

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Genbank accession
YP_009147625.1 [GenBank]
Protein name
tail sheath protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATQTFSVAPSVQFTERDVTLNSTPSVDVIGATVGAFQWGEAEKPIRVTNGADGLVAKFFKPKNDALAAMDFLVTESYLNLSSVAWVCRMVGPTAKNAVTKGQTAIIIKNSDEFEGVNVSASVTWAGRYPGALANDLVIDVCDSATFPTWEFRNAFAYTPQPGEFHVVVVDTVGRITGTNGATSQVERIQLTGTATAAGKITVNGTDVTYAKDDTAAVVAGKISDKLKALTGEAQIWSDVGYKSNTVTLTLAAIGPQTQSAVVNDANGIVGKISTTTVGSSGTIVPGETFQLLQLNPGAKRTDGSNAYFKDVINGSSYWVYVLANTLAAGRVLLTGGVDDDNIDRIEGYEMLKNAEAYSAKPIFGYADEIGVHQHMIDVSGSRRDTVTFVSPPRDAVVNNRGREADAVEQWRSDLLRDSSYFFMDDNWGYYYDKYNDVYRWIPACGATAGVWARNIRVAGIYKSPAFHNRGKYSGFNKMAWSADSGQRTQLYKVSVNSIVTFPTEGIVLYGDKTGLSAPSAFDRINVRGLFIMAEQNITASAKYYLGENNDANTRLLFTNSIAPYIRTLIGLGAISDGKVKCDEDNNPAAVVAANQMVAGVWLKPAYSINWIYLDFAAVRPDIEFSEVESGGGIVSAS
Physico‐chemical
properties
protein length:638 AA
molecular weight: 68682,20180 Da
isoelectric point:5,12303
aromaticity:0,10031
hydropathy:-0,09279

Domains

Domains [InterPro]
G3DSA:3.40.50.11780
STR
29–225
G3DSA:3.40.50.11780 G3DSA:3.40.50.11780 IPR020287
DC_1098
STR
90–347
DC_1098 IPR020287
IPR052042
Unmapped
197–598
IPR052042
YP_009147625.1
1 638
Architecture
STR
TAS
STR 29-484 | TAS 518-616 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009147625.1
1 638
Domain Start End Length (AA) Confidence
N-terminal 1 164 164 0,8038
Central domain 165 404 241 0,3275
C-terminal 405 638 233 0,2145
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-164
Central
165-404
C-terminal
405-638

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage phiEa2809
[NCBI] 		1564096 Uroviricota > Caudoviricetes > Pantevenvirales > Nezavisimistyvirus > Nezavisimistyvirus Ea2809
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009147625.1 [NCBI]
Genbank nucleotide accession
NC_027340 [NCBI]
CDS location
range 114725 -> 116641
strand -
CDS
ATGGCAACACAAACTTTTAGCGTCGCACCTTCTGTACAATTCACAGAACGTGACGTTACCCTGAACTCCACTCCGTCTGTAGACGTGATTGGAGCGACCGTAGGCGCATTCCAATGGGGTGAAGCCGAGAAACCAATCCGTGTGACCAATGGTGCTGATGGTCTGGTTGCCAAGTTCTTCAAACCGAAGAATGACGCGCTGGCTGCCATGGACTTCCTGGTCACTGAAAGCTATCTGAACCTTTCTTCTGTTGCCTGGGTATGCCGTATGGTCGGCCCGACTGCGAAGAATGCTGTCACCAAAGGTCAGACTGCGATCATCATCAAAAACAGCGATGAGTTCGAAGGCGTTAATGTCTCAGCCTCAGTAACCTGGGCGGGCCGCTATCCAGGCGCTCTGGCGAATGACCTGGTGATCGACGTCTGTGACAGCGCGACATTCCCTACCTGGGAGTTCCGCAACGCGTTCGCTTACACACCACAGCCGGGTGAATTCCACGTTGTTGTAGTCGATACTGTCGGCCGCATCACTGGGACCAATGGCGCGACCTCTCAGGTTGAGCGTATCCAGCTGACTGGTACTGCGACTGCTGCTGGTAAGATCACTGTCAACGGCACTGATGTTACCTATGCCAAAGACGATACTGCTGCTGTAGTCGCCGGTAAGATCTCTGACAAGCTGAAAGCACTGACTGGCGAAGCACAGATCTGGTCTGACGTGGGCTACAAGTCCAACACAGTTACCCTGACCCTGGCGGCTATCGGCCCTCAGACTCAGTCGGCTGTGGTAAACGACGCCAATGGCATCGTCGGTAAGATTTCTACCACCACTGTTGGCTCTTCCGGTACGATCGTCCCTGGCGAGACCTTCCAGCTGCTTCAGCTGAATCCGGGTGCCAAGCGTACTGATGGTTCCAACGCCTACTTCAAAGACGTGATCAACGGTTCTTCTTACTGGGTGTATGTCCTGGCGAATACCCTGGCTGCTGGCCGTGTTCTGCTGACTGGCGGCGTGGACGATGACAACATCGACCGTATTGAAGGTTATGAGATGCTGAAGAATGCCGAAGCATACTCTGCCAAGCCAATCTTCGGTTATGCTGACGAGATCGGTGTTCACCAGCACATGATCGACGTATCTGGATCCCGCCGTGATACTGTGACATTCGTATCTCCTCCGCGTGATGCTGTTGTGAATAACCGTGGCCGCGAAGCCGATGCTGTTGAGCAATGGCGTAGTGACCTCCTGCGTGATTCCAGCTACTTCTTCATGGATGACAACTGGGGTTACTACTACGACAAGTATAACGACGTTTACCGTTGGATCCCAGCTTGTGGCGCTACCGCAGGTGTCTGGGCGCGTAACATCCGTGTTGCGGGTATCTACAAGTCCCCGGCGTTCCACAACCGTGGCAAGTACTCTGGCTTCAACAAGATGGCGTGGTCAGCCGATAGTGGTCAGCGCACCCAGCTGTACAAGGTGAGCGTGAACAGTATCGTTACCTTCCCAACCGAAGGCATCGTGCTGTATGGTGATAAGACCGGCCTGAGCGCTCCTTCAGCGTTCGACCGTATCAACGTGCGCGGCCTGTTCATTATGGCTGAGCAGAACATCACCGCGTCTGCCAAATACTATCTGGGTGAGAACAACGATGCCAACACGCGTCTGCTGTTCACTAACTCAATTGCACCGTACATCCGTACACTGATCGGTCTGGGAGCAATCTCTGACGGTAAAGTGAAGTGCGATGAAGACAACAACCCGGCTGCGGTAGTCGCTGCCAACCAGATGGTCGCGGGTGTGTGGCTGAAGCCAGCCTACTCCATCAACTGGATCTATCTGGACTTTGCCGCAGTACGTCCAGACATCGAGTTCTCAGAAGTCGAGTCTGGCGGCGGTATCGTTTCAGCGTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b8e6d789c7620606cc53bd3ef290bee5303143ab3b299fe09b6039aba61df8d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8805
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a new ViI-like Erwinia amylovora bacteriophage Lagonenko,A.L. and Valentovich,L.N. — — GenBank