Protein

Genbank accession
CAB4159571.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSTRKLLGDREIKGTITAEGLTITGAFTLPSTDGSPGQALVTDGAGNVSWQAVASSSGSGTSGSSGTSGIGSSGTSGTSGIDGSSGTSGIDGSSGTSGIDGSSGTSGIDGTSGTSGIDGTSGTSGTDGSSGSSGTSGTDGSSGSSGIDGSSGTSGVDGSSGTSGIDGTSGTSGIDGTSGTSGTSGTSGTSGTDGTSGTDGSSGTSGTSGIDGSSGSSGADGTSGTSGSSGSSGIDGSTGTSGTSGIDGTSGTSGIDGTSGTSGIDGSSGTSGISGTDGTSGTSGTSGIDGTSGTSGTSGIDGTSGTSGTSGIDGTSGTSGTSGIDGTSGTSGTSGTSGTSGTSGTDGSSGTSGTSGTDGTSGTSGTSGSAGSSGTSGIDGQNGLSSSYYNYKTKTTVYSGDPGNTFVLWDDSVQVDSTTINVSTETLDLVDINVFLSLIAEGQFIVLQDVDQSGDFQKWEVSGTPINNTGYWTLPVTLIDSGGAGTTNFSDNLDIILVLFTVSGSSGTSGSSGTSGTSGTSGSSGTTGTSGTSGSSGTSGTSGTDGSSGTSGTDGSSGTSGTSGTSGSSGTTGTSGTSGSSGTSGTSGSSGTTGTSGSSGSSGISGVDGTSGSSGSTGTSGTSGTSGSSGSSGVDGGLAIWRYSDTTDTSVDPGSGYFRLNDTWSAASTEISVDDFSYSPNVLFSGFLNTIGSGSILRISSIVDSSVYKVLQVTSTVPFQGGYETYTITQLASSGPDPLPGDGFLFDFAGSPGSSGSSGSSGIDGTSGTSGIDGTSGTDGTSGTDGSSGSSGTSGTSGTSGTSGSSGTSGSSGSSGIDGTSGTSGIDGTSGTSGTSGTSGTDGSSGTSGTSGSSGSAGSSGTSGTSGTSGTSGSSGVQGPPGQSSSVFQYKANTLITSGNPGNTYIAWNNANQTSASVLIINMNTSDGLDIDNFLALIISGQKILIQDRDLSENYQKFEVNGTPTQYGTSPNYYWEIPVTFITSLGTGTTGFANDEELLIGLFSFSGTSGTSGTSGSSGSSGTSGTSGTDGTSGTSGTSGSSGTSGTSGTSGTSGIDGTSGTSGTSGTSGTSGTDGSSGTSGTSGSSGTSGTSGSSGSSGIDGTSGTSGTSGIDGTSGTSGTSGTDGSSGTSGTSGTDGSSGTSGTSGTDGSSGTSGTSGSSGSSGINGTSGTSGIAGTSGSSGSAGSSGTSGTSGLTYFTEAQSTAAPNATIPVDSLTAVSATTNADIAIRPKAGGALLAA
Physico‐chemical
properties
protein length:1242 AA
molecular weight: 113718,85740 Da
isoelectric point:4,05003
aromaticity:0,03945
hydropathy:-0,35451

Domains

Domains [InterPro]
IPR050938
30–404
IPR050938 IPR008160 IPR008160 IPR008160 IPR008160 IPR008160 IPR008160
IPR008160
326–381
IPR008160
CAB4159571.1
1 1242
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4159571.1 [NCBI]
Genbank nucleotide accession
LR796670 [NCBI]
CDS location
range 254557 -> 258282
strand +
CDS
ATGAGCACTAGGAAGTTACTAGGAGATAGAGAAATCAAAGGAACTATAACAGCGGAAGGACTTACTATAACTGGTGCATTCACATTGCCTAGCACTGACGGTTCTCCTGGACAAGCACTGGTAACAGACGGCGCAGGAAATGTTAGCTGGCAAGCAGTTGCAAGTTCTTCAGGAAGTGGTACTTCAGGATCAAGCGGAACATCCGGCATAGGAAGTTCAGGTACATCTGGTACTTCTGGAATCGACGGTTCATCCGGTACTTCTGGAATCGATGGTAGTTCTGGAACCAGTGGAATCGATGGATCGTCAGGTACAAGCGGAATAGACGGGACATCAGGTACGAGCGGAATAGACGGGACATCAGGTACAAGCGGAACTGATGGGTCATCCGGCTCAAGTGGGACATCTGGAACAGACGGATCTAGTGGGTCTAGTGGAATAGATGGATCAAGTGGTACATCAGGAGTCGACGGATCTTCAGGCACAAGCGGAATTGATGGTACTTCAGGTACTAGTGGAATCGATGGTACTAGTGGTACTTCAGGTACTAGTGGTACTTCAGGTACTAGTGGAACTGATGGAACATCAGGAACAGACGGTTCTAGTGGAACTTCTGGAACTAGTGGAATCGATGGATCAAGTGGTTCGTCCGGAGCAGACGGTACCTCGGGAACCAGCGGAAGTTCAGGTAGTTCTGGAATTGACGGTTCAACCGGTACGTCTGGGACAAGCGGAATTGATGGTACATCTGGGACAAGCGGAATTGACGGTACTTCAGGTACTAGCGGAATTGATGGTTCAAGCGGTACTTCAGGAATTAGTGGAACAGATGGAACTAGCGGTACTTCAGGTACGAGTGGAATAGATGGAACTAGCGGTACATCAGGTACTAGCGGAATTGACGGCACTTCAGGTACATCAGGCACTAGCGGAATTGACGGCACTAGCGGTACATCAGGTACTAGCGGAATCGATGGTACATCAGGAACCAGTGGAACTTCTGGAACCAGTGGAACTTCTGGAACCAGTGGAACTGATGGTTCAAGTGGTACTTCAGGAACGTCAGGAACAGATGGTACTTCAGGAACCTCGGGAACAAGCGGATCAGCTGGATCTAGCGGTACTTCAGGGATAGACGGACAAAATGGTCTCTCCTCAAGTTACTATAATTATAAAACAAAGACTACTGTTTATAGTGGAGATCCTGGAAATACTTTTGTTCTTTGGGATGATTCTGTACAAGTAGATTCAACAACGATAAATGTAAGTACTGAGACTTTGGATCTAGTCGATATTAATGTTTTCCTAAGTTTAATAGCTGAAGGACAATTCATTGTATTACAAGATGTAGATCAAAGTGGTGATTTTCAAAAATGGGAAGTTTCAGGAACACCTATAAACAATACTGGATATTGGACTTTACCTGTAACTCTAATAGATTCTGGAGGAGCAGGTACAACTAATTTTAGTGACAATTTAGATATAATACTTGTTTTATTCACAGTTAGTGGATCTAGTGGTACTTCAGGGTCCTCAGGAACAAGCGGTACAAGCGGGACTTCAGGATCTAGTGGTACAACTGGAACGAGCGGTACTTCTGGATCTAGCGGAACTAGCGGTACTTCTGGAACAGACGGATCTAGCGGTACCTCTGGAACAGACGGATCTAGCGGAACTTCTGGAACGAGCGGTACATCTGGTTCTTCAGGAACAACTGGGACGAGCGGTACATCTGGGTCAAGCGGGACGAGCGGTACTTCTGGTTCTTCAGGAACAACTGGGACAAGCGGTAGCTCTGGGTCAAGCGGTATATCTGGAGTAGATGGAACTAGTGGAAGTTCAGGTTCAACAGGTACTTCAGGAACAAGTGGCACTTCGGGATCAAGTGGCAGTTCAGGAGTAGATGGAGGGCTTGCTATTTGGAGATATAGCGATACCACAGATACTTCAGTTGATCCTGGAAGCGGATACTTTAGGCTTAACGATACGTGGTCAGCTGCTTCAACTGAAATATCAGTTGACGATTTTTCATATAGTCCAAACGTATTGTTCTCTGGTTTTTTAAATACAATTGGATCTGGTTCAATTTTAAGAATATCTTCTATTGTAGATTCGTCAGTATATAAAGTACTACAAGTAACGTCTACTGTACCTTTCCAAGGAGGATATGAAACTTATACTATCACACAGCTAGCATCTTCTGGTCCAGACCCATTACCTGGTGATGGGTTCTTATTTGATTTTGCAGGATCTCCAGGATCAAGCGGATCGAGTGGATCTTCAGGAATTGATGGAACTAGTGGGACAAGTGGAATTGATGGAACTAGTGGAACTGATGGAACTAGTGGAACTGATGGAAGCTCAGGTTCATCAGGAACGAGCGGTACTAGCGGTACTAGCGGTACTTCAGGTAGTTCAGGAACCAGCGGCAGCTCAGGTAGCTCAGGAATTGACGGCACTAGTGGTACTTCCGGAATTGACGGAACTTCTGGAACAAGCGGTACTTCAGGTACTAGCGGAACAGACGGATCTAGCGGAACTTCAGGAACTAGTGGTAGCTCAGGTAGTGCAGGTTCTAGCGGAACTTCGGGCACTAGCGGTACTTCGGGAACAAGTGGATCCAGTGGAGTTCAAGGACCTCCAGGACAGTCATCGAGTGTATTTCAATATAAAGCAAACACGTTAATTACTTCTGGAAATCCAGGAAATACTTATATTGCATGGAATAATGCGAATCAGACTAGTGCATCAGTGTTGATCATTAACATGAATACATCTGATGGATTAGATATCGATAATTTCCTAGCCTTAATTATATCTGGGCAAAAGATACTTATTCAAGACAGAGATTTAAGTGAAAATTATCAAAAGTTTGAAGTAAACGGTACTCCTACTCAATATGGAACTTCGCCAAATTATTATTGGGAAATACCTGTAACCTTTATAACTTCTCTAGGAACAGGTACTACTGGTTTTGCAAATGACGAAGAATTACTAATTGGTTTATTTAGTTTTAGTGGTACTTCAGGTACAAGCGGTACTAGCGGATCCTCAGGGTCTTCAGGTACTTCAGGTACTAGCGGAACAGACGGCACAAGCGGAACAAGTGGTACTTCTGGATCATCTGGAACTAGTGGTACTTCTGGAACCAGTGGCACTAGTGGAATTGACGGAACTTCAGGTACTTCAGGTACGAGCGGTACTTCGGGTACGAGCGGAACAGACGGATCTAGTGGAACTTCAGGAACTAGTGGATCTAGCGGTACTTCAGGTACTTCTGGATCAAGCGGCAGCTCAGGAATAGATGGTACTTCTGGAACTAGCGGTACTAGTGGAATTGACGGAACTTCTGGAACCAGCGGAACAAGCGGAACAGACGGTTCTAGCGGTACTTCTGGAACTAGTGGAACAGACGGATCAAGCGGTACTTCTGGAACTAGTGGAACAGACGGTTCTAGTGGAACAAGTGGAACTTCTGGGTCAAGCGGTAGCTCTGGAATAAATGGTACTTCTGGAACAAGCGGAATCGCCGGTACTAGTGGTAGCTCAGGTAGTGCAGGTTCTAGCGGAACTTCGGGCACTAGTGGTCTTACTTACTTTACTGAAGCACAATCTACAGCAGCACCTAATGCTACAATTCCTGTAGATAGTTTGACTGCAGTATCAGCAACAACAAATGCAGATATTGCAATAAGACCTAAAGCAGGTGGTGCTTTGTTAGCTGCT

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4dc7e17731bf6445973e542c81b74f486a2da3ef11590507078467618b94e685
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2229
Evidence 0,2229
Download PDB

Literature

No literature entries available.