Protein

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Genbank accession
AGB06973.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSSINLPGGGQPLPKYVEEAPVNGLLYGRKDEAWEPIPEDSLTPFPLGTTPNSFDAETGDRAAAIALRDAYASANPSWVAFYVNNPTSAIDLVYEDISVGGTVAERQTYTGTQWISQRIVEGIPGPIGPSGEGSIPPFASIAERDSFFASSGNKSLLKKGLPVFVQEFEGRASSYYWRGETNPNTYDASKFSLAAVQSGNGDLYLANAHKISSSGQNIAITNIIDNVSFHPVWQTYEEGNTATVRVRSIESVTEYSDKSGQLTNPRWELAQMANNRTLYSVMVDFVNAYDEIDVVVYKNTDEYYQTKIFDITPGEVDVLIEPPFDIRSMDVLELELRNPNLDVVVWGNLSTGIPWNKPTTRDFTDETVVIQPDLYAVETRVSDIEANAIVTGDNVSELTNDAGYISDKDIIFQKSNNTGTNVLTLNGTGEEGTIPLSQTDENGVLFEYSSTTDNFRPLEDKPMHIKLRISIDRSGGGSNPEIITWVESAATDTTVPNAFTQETSAFRMVDLQTDRTLFLIDTILNMDSSRYYRIRLRNLNGDDFDVDTFGPFTTSSGNDIFAPAVEFMLSR
Physico‐chemical
properties
protein length:571 AA
molecular weight: 62974,85330 Da
isoelectric point:4,31831
aromaticity:0,09807
hydropathy:-0,34641

Domains

Domains [InterPro]
G3DSA:1.20.5.320
STR
11–44
G3DSA:1.20.5.320
DC_1057
STR
38–548
DC_1057
AGB06973.1
1 571
Architecture
STR
STR 11-548 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGB06973.1
1 571
Domain Start End Length (AA) Confidence
N-terminal 1 402 402 0,9922
Central domain 403 560 159 0,0161
C-terminal 561 571 10 0,9887
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-402
Central
403-560
C-terminal
561-571

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VH7D
[NCBI] 		1262539 Uroviricota > Caudoviricetes > Pantevenvirales > Schizotequatrovirus > Schizotequatrovirus vh7d
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
58e6b8f1acb229e35851fc199e626d68bbe6cc3281e0c9dc46686fded9efdf70
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5831
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50