Protein

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Genbank accession
YP_009190819.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAEPILMAAFGEDFVETRILSEANSVKYWLKAYATHSNAVPNKPELNINGAFDMTSSLRRGINVVQVNGDSFINFKTFDVTTDDNNANNKAFVEYANGLTSGLYIIMTHERFQSSPLIDRWFKNKWSASWPGSDFSKSFPNSAYVGVLGAAKGRILIESFYGNDGVVKEDSRAKVDTVYDNVGDVGYTGCPYRSIEDTNEYSDSTGYEYKRYPVQNESISKIADYGLSPGDSVFLVCDMYASKSLLDAGSTTRANLRWFKGTSLLSSSVSLEIPKNGADRWLRFERFTAVPTDADGFTIVVSRYPKTSVVGDSKIKNLVFVQTAHSEKLNSVVQEFGVNGVRMNKGVEGGTTMIMELPNSKVDPSGVIPVQSFRETSD
Physico‐chemical
properties
protein length:378 AA
molecular weight: 41735,18220 Da
isoelectric point:5,34692
aromaticity:0,11111
hydropathy:-0,32037

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009190819.1
1 378
Domain Start End Length (AA) Confidence
N-terminal 1 65 65 0,4795
Central domain 66 264 200 0,5171
C-terminal 265 378 113 0,3996
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-65
Central
66-264
C-terminal
265-378

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage JD18
[NCBI] 		1698360 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Jiaodavirus
Host Klebsiella
[NCBI] 		570 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009190819.1 [NCBI]
Genbank nucleotide accession
NC_028686 [NCBI]
CDS location
range 140967 -> 142103
strand +
CDS
ATGGCTGAACCAATTTTAATGGCAGCCTTTGGTGAGGATTTCGTGGAAACACGAATCCTCTCTGAGGCAAACTCTGTGAAGTATTGGCTAAAAGCTTATGCTACACATTCTAATGCTGTTCCGAATAAGCCAGAACTGAATATTAACGGTGCCTTTGATATGACCTCCTCCTTACGGAGGGGGATTAACGTTGTTCAAGTTAATGGTGACAGTTTTATTAACTTTAAAACATTTGACGTTACCACTGATGACAACAACGCTAATAACAAAGCGTTTGTAGAATATGCAAATGGATTAACTTCAGGATTGTATATTATAATGACACATGAACGATTTCAATCCAGTCCGTTGATAGATAGATGGTTTAAAAACAAGTGGTCTGCTTCTTGGCCAGGTTCTGACTTTTCCAAATCATTTCCAAACTCTGCCTATGTTGGAGTGCTCGGAGCAGCAAAAGGACGTATATTAATTGAGTCATTTTACGGAAATGATGGTGTAGTTAAAGAAGATTCCAGAGCTAAAGTCGATACAGTGTATGATAACGTTGGCGATGTAGGATATACAGGCTGCCCTTATCGTTCCATTGAAGACACTAATGAGTACTCGGATTCTACTGGATATGAATATAAGCGATATCCAGTTCAAAATGAATCTATAAGCAAAATCGCTGATTATGGATTATCTCCCGGGGATTCGGTGTTTTTAGTGTGTGATATGTATGCATCTAAAAGCCTTCTTGATGCAGGTTCTACTACTAGGGCTAACTTGAGATGGTTCAAAGGTACATCTTTATTATCTTCAAGCGTATCATTAGAAATTCCAAAAAATGGAGCTGATAGATGGCTAAGATTTGAAAGATTTACCGCTGTTCCTACAGACGCTGATGGATTTACTATTGTGGTATCACGATATCCAAAAACGTCTGTAGTTGGTGATTCTAAAATCAAAAACCTTGTATTTGTTCAAACCGCACACAGCGAAAAACTTAACAGTGTTGTTCAAGAATTTGGCGTGAATGGCGTAAGAATGAATAAAGGCGTTGAAGGAGGAACCACTATGATTATGGAACTTCCAAATTCAAAAGTCGATCCGAGCGGTGTTATTCCAGTTCAATCGTTCAGAGAAACATCTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d24002a64799b73e723e5cfc115983bde28536e1b5862ea8b05d32bb39decb90
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6685
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of JD18-a novel lytic bacteriophage for Klebsiella pneumoniae Fan,J., Zhang,X., Guo,X., He,P. and Zhang,Y. 2023-10 — GenBank