Protein

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Genbank accession
YP_007003568.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALNNQYLILDPNLKRIGTLTVDGATKFSNDSVKIQLADSDTTSTSYDDDVNVGSDDNFNGTINLNAQSKKFDHQGSLDVLQGQPDSDKVVAGNNLAYYDELSGHWYVMYIYSTDDASSAAVKHTTTINFTNLCLYTLAHHYPVAITASASSIQTAFNQCFNATGWTLDYQTTNVMTPSITIDGKTKASTLVQTLIQTYNVEIDPYVEIDSQGNITKKVCVITDQLNADVVYNEAVFGKNMTSLKRTTVSTPVTKLIAYGDNGNTMSAVNDGKPYIVDDEANQKYNPDWQSGLYYEAVITANSIEDPSGIKAWAEEMLQLYNHPRTYYEVSVTSKFNPPLGATIRFKDELIKPALDASGRVIQRTISFSNPYGNTVGFGEYVTVPVATPAWMQGYQSAINSAIEKAREDASSVKPVALTPDGNNFTDTAQTKRLILQAWEGNTNISAYIDNKGFIWHRYNTDGTLDTSFNQTGYLVQAAYNSVGTLHGTIETRYIQDEPEIKLKTSAIRSLGSFSPDDSTLGITEAAQYMCPLSNGQYITSRAINQSTTGDTMFVLHDTNFKPISKMIVSHGGHGSSFSIEEVSGAIYIWSATKPNLNVNEYAVSRIPYLANVTLGNDDDRITRFCTVDRYIRVSVDFKHGYVLCGYVNGKHDVLRLDEVKQGNYDVLYSFDVDNYGFDENQQTYQSQGIDFPYVYFNSGDYNMKDPRMVYAINVVHGGQEFASNYLLDMNLGLTDDVIEPETCNIIYSQTNQPELLATFNCQYQGASLERVFVIPIKERLPMATISND
Physico‐chemical
properties
protein length:789 AA
molecular weight: 87568,25590 Da
isoelectric point:4,71260
aromaticity:0,10520
hydropathy:-0,34588

Domains

Domains [InterPro]
DC_1956
STR
1–590
DC_1956 DC_1974
IPR007119
Unmapped
68–379
IPR007119 IPR048799
IPR010572
ENZ
147–379
IPR010572
YP_007003568.1
1 789
Architecture
STR
RBD
STR 1-590 | RBD 591-789
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007003568.1
1 789
Domain Start End Length (AA) Confidence
N-terminal 1 549 549 0,9892
Central domain 550 778 230 0,3395
C-terminal 779 789 10 0,0462
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-549
Central
550-778
C-terminal
779-789

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Sha1
[NCBI] 		947981 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus sp.
[NCBI] 		1591 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007003568.1 [NCBI]
Genbank nucleotide accession
NC_019489 [NCBI]
CDS location
range 20881 -> 23250
strand +
CDS
ATGGCTTTAAATAACCAGTATTTAATTCTAGACCCTAATTTAAAGCGGATTGGTACATTGACCGTTGATGGGGCTACTAAGTTTTCAAACGATAGCGTGAAGATACAACTAGCTGATTCAGACACAACTAGTACGTCATATGATGATGACGTTAATGTGGGCTCTGATGACAACTTTAACGGCACGATTAATCTAAATGCCCAGTCTAAGAAGTTCGATCATCAAGGTTCATTAGACGTGCTTCAAGGCCAGCCTGATTCAGATAAAGTAGTCGCTGGCAACAACCTAGCTTATTATGACGAGCTATCAGGCCATTGGTATGTCATGTATATCTATTCAACTGATGACGCTTCTAGTGCCGCTGTTAAACATACAACGACCATTAACTTTACCAATCTATGCTTATACACACTAGCTCATCATTACCCAGTGGCAATTACGGCTAGTGCTAGTTCGATTCAGACGGCTTTTAACCAGTGCTTTAACGCTACTGGCTGGACGCTAGACTATCAGACTACTAATGTGATGACTCCATCGATTACCATTGATGGTAAAACAAAAGCTAGTACCTTAGTGCAGACACTAATCCAGACCTATAACGTTGAGATCGATCCTTATGTTGAGATTGACTCACAAGGTAACATCACGAAAAAGGTGTGTGTCATTACTGACCAGCTTAATGCTGATGTGGTCTATAACGAGGCAGTATTTGGTAAGAATATGACTAGCTTAAAGCGAACAACGGTGTCAACACCTGTTACCAAGCTGATTGCTTATGGTGACAACGGCAATACAATGTCAGCAGTTAATGATGGCAAACCTTACATTGTTGATGATGAGGCTAACCAGAAATATAACCCTGACTGGCAATCTGGTTTGTACTATGAAGCAGTCATTACGGCTAACTCAATTGAAGACCCTTCCGGAATTAAGGCTTGGGCCGAAGAAATGTTGCAATTATATAATCACCCGCGAACGTATTATGAGGTTAGTGTAACGTCTAAATTTAACCCGCCATTAGGTGCCACGATTAGGTTTAAAGATGAGTTAATCAAGCCAGCATTAGATGCCAGTGGCCGAGTCATTCAACGGACAATTAGTTTTTCTAACCCTTATGGCAATACAGTTGGCTTTGGTGAATATGTCACGGTACCTGTTGCAACACCAGCCTGGATGCAAGGCTATCAAAGTGCTATTAATAGCGCCATTGAAAAGGCAAGGGAGGACGCTAGCTCGGTTAAACCGGTTGCTTTAACTCCTGACGGCAACAACTTCACTGATACTGCGCAAACCAAACGGTTAATTTTACAGGCTTGGGAAGGTAACACCAATATTTCAGCCTATATTGATAACAAGGGATTTATTTGGCACCGCTATAATACTGACGGCACCCTTGATACTAGTTTCAATCAAACTGGCTATTTAGTACAAGCAGCATACAATTCCGTTGGCACACTGCACGGGACTATTGAGACTCGTTACATTCAAGATGAACCAGAGATTAAGTTAAAAACTAGTGCTATTCGTAGTTTGGGTAGTTTTAGCCCAGACGACAGTACACTAGGAATAACTGAGGCGGCACAATATATGTGTCCTTTGAGCAACGGTCAGTATATAACTAGCCGGGCGATTAATCAAAGTACAACCGGCGATACCATGTTTGTCTTACATGACACTAATTTTAAGCCAATTAGCAAGATGATTGTTTCGCATGGCGGGCATGGCTCTAGCTTTTCAATCGAAGAGGTAAGTGGTGCTATTTACATTTGGTCCGCAACCAAGCCTAATTTAAACGTTAACGAATATGCAGTTAGTCGCATACCCTACCTTGCTAATGTTACCCTAGGCAATGATGATGATAGAATCACACGTTTTTGCACTGTCGATCGTTATATAAGAGTCAGCGTTGATTTCAAACATGGGTACGTACTGTGTGGCTACGTGAATGGTAAACATGATGTGCTACGACTCGATGAGGTTAAACAAGGTAATTATGATGTGCTATATAGTTTTGATGTTGACAACTATGGGTTTGACGAGAACCAACAAACCTACCAATCACAAGGCATTGACTTTCCATATGTGTACTTTAACTCGGGTGATTACAACATGAAAGACCCCCGTATGGTGTACGCCATTAATGTTGTTCATGGCGGGCAAGAATTCGCCTCTAACTATTTACTGGATATGAATTTAGGGTTAACCGATGATGTTATCGAACCTGAAACATGCAACATTATCTATAGTCAGACTAACCAGCCGGAGTTATTGGCGACTTTCAATTGTCAATATCAAGGTGCTTCTTTAGAACGTGTCTTTGTAATACCAATTAAGGAACGTTTGCCAATGGCTACAATTAGCAATGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f246453f773b21d79151ac6bf439e9028360f0319fee29e910c503bef907a110
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8085
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50