Protein

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Genbank accession
XRA41319.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,54
TF
Evidence RBPdetect2
Probability 0,54
Protein sequence
MADLKRKFRAQEGLDAAGEKVINVQTADRTVPSDGVNVEFLVQENTLQQYDETRWYPKDFAVIYDNRIWVSNREIVKPSGAFNELYWTALRTDAKWKTESAGTIVLKSGDFISVNTENRGTIKFVLPNNPQDGDTIFLKDIGGQPGYADVTIDASIQSIVWLGSQVRSVRMTHPYSQMVLVFSNRLWQLYISDNERTATTITPASIHEAQANEFIVRRYTTGAPIRVTLPKFANDGDIINFTDMDGMNPLFHMFVSTFDANTSIGSVGTTSLEVRSSGDGFIVFDAVEKLWRIWDGDLRTRLRIIKEDTEVRPNDHVMVFGTNNSTVKKVVITLPPAPAIGDTVKISLNYMRKGQTVDITCTGTDTIAASVSLLQFPKRSEYPPDATWVQNKTLSFNGDTSYVPVLDLSYIEDAGLKYWVVSDNMPTVERVDSKTDTTRARLGVIALATEAQAQVDLENNPEKELAITPETLAKRVATKLRRGIARLVTLTEIQAPTAGPHLDDVIVTPAMLNEKTATETRRGVAEIATQSETDGSTDDTTIVTPKKLHNRKASEILTGILALVKTGITTVAGVDRDTKGTNVYDNTENTKAVTPASLFENKATYTSQGGTYLATENEVINGTAHDPKIPTAVTPVELHKKTATEGRIGFTEIATQPETDAGTDDFRYITPKKLSGRKATQDLTGLARIATQPEFNAGALDDVISTPFKIKTYFSDPARHSVELLSGLVESGNSWDHYKLDIKKASETQRGTLAVATKILVDAGVDDQTIITPKKLQDKKTSETTEGIIQIATRLETTTGTVGNKAVPPVHLKYAIQEQSDWEATPTRRGPVKLTELALTFVGDKVFGSGVKFNATTGLYENDDAKLTAGNYFKTGYAVSPFEMNKTLQNFLPINAIATDSHKLDGLDSLQFIRRDIDQTVNGSLTLTKQLNTSAPLVSSSTSKFTNVMATIDLTVGDDSSHSVINLNAKGNHWLIDAQSQSTYLDFTADADVLRLKRDGDVEVGQTLKAGNRIDAMKGFSVEGGTMVINPTPSNIQFGSQSKATNIQTTDASNLTVTDSTGTSTVITTKNMVNQIGLNFVKKIGDSMTGNLLIDATLRVQIPEGVVTPDQAPTDANPNAWSSSIKTSAVYNKLPGFVVPVYGTNEEGNPVAIDYTEVKGPGTLTQHGIDKNSIWQIWAPRPAAVDATYFAQTFWIRNFNALTGKWDKWGRMYTSNNPPTSKEIGAVAAGGSAFDNLTIRDWLQIGNVRITPNPVTQSVDFTWIP
Physico‐chemical
properties
protein length:1265 AA
molecular weight: 138331,84750 Da
isoelectric point:5,45935
aromaticity:0,07352
hydropathy:-0,32150

Domains

Domains [InterPro]
DC_1986
ATT
9–125
DC_1986 DC_1209
IPR048391
ATT
1113–1213
IPR048391
XRA41319.1
1 1265
Architecture
ATT
STR
ATT
STR
ATT 9-125 | STR 342-1112 | ATT 1113-1213 | STR 1214-1248 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRA41319.1
1 1265
Domain Start End Length (AA) Confidence
N-terminal 1 980 980 0,9176
Central domain 981 1179 200 0,2223
C-terminal 1180 1265 85 0,1108
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-980
Central
981-1179
C-terminal
1180-1265

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage NM4.3
[NCBI] 		3413206 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA41319.1 [NCBI]
Genbank nucleotide accession
PV400811 [NCBI]
CDS location
range 155056 -> 158853
strand +
CDS
ATGGCCGATTTAAAAAGAAAATTCAGAGCTCAAGAAGGTCTGGATGCGGCGGGTGAGAAAGTAATTAACGTACAAACCGCTGATCGTACTGTTCCGAGCGATGGTGTTAACGTTGAGTTTCTCGTCCAAGAAAACACATTACAACAATACGACGAAACCAGATGGTATCCGAAAGATTTCGCAGTGATTTATGATAACCGAATTTGGGTATCAAATCGAGAAATCGTTAAACCTTCTGGCGCTTTCAACGAACTCTATTGGACAGCTTTACGTACTGACGCAAAATGGAAAACTGAATCTGCTGGAACAATAGTCCTTAAATCAGGGGACTTTATTTCTGTTAATACAGAAAATCGTGGAACTATTAAATTTGTTCTTCCTAATAATCCACAAGATGGCGATACTATTTTCTTAAAAGATATAGGTGGGCAGCCAGGATATGCTGATGTAACAATTGATGCTTCTATTCAATCTATCGTTTGGCTTGGGTCTCAAGTTCGTAGTGTACGAATGACTCATCCATATAGTCAAATGGTTTTAGTTTTCAGCAATCGTTTGTGGCAACTTTATATAAGCGACAATGAGCGCACGGCCACAACAATTACCCCGGCGAGTATTCATGAAGCACAAGCTAATGAATTCATCGTTCGTCGTTATACGACTGGGGCTCCTATTCGTGTTACTCTTCCTAAGTTCGCGAATGATGGTGATATCATTAACTTTACTGACATGGATGGAATGAACCCTTTATTCCATATGTTTGTGAGCACGTTTGATGCTAATACTTCTATTGGATCAGTAGGAACAACCTCATTAGAAGTGCGTTCTTCTGGCGATGGATTTATTGTATTCGATGCAGTTGAAAAATTGTGGAGAATTTGGGATGGTGATCTCCGTACTCGTCTTCGTATTATAAAAGAAGATACTGAAGTACGTCCGAATGATCATGTAATGGTGTTTGGTACAAATAATAGCACTGTTAAGAAAGTTGTAATTACTCTGCCTCCAGCACCAGCTATTGGTGATACTGTTAAGATTTCTTTGAACTATATGCGCAAAGGTCAAACAGTTGATATCACTTGTACTGGAACAGATACTATAGCAGCGTCAGTTTCATTACTTCAATTCCCTAAACGTTCAGAATATCCGCCAGACGCAACGTGGGTACAGAATAAGACTCTAAGCTTTAATGGTGATACTTCTTACGTTCCAGTATTAGATTTGTCTTATATAGAAGACGCTGGATTGAAGTACTGGGTTGTTTCTGATAATATGCCGACAGTAGAACGTGTCGATTCAAAGACCGATACTACTCGTGCTCGTTTAGGTGTTATTGCATTGGCTACCGAAGCTCAAGCTCAAGTAGATCTTGAAAATAACCCAGAAAAAGAATTAGCAATTACTCCAGAAACATTAGCTAAAAGAGTTGCTACTAAACTTCGTCGTGGTATTGCTCGTTTAGTTACTTTAACTGAAATTCAAGCTCCAACCGCCGGTCCTCATCTCGATGATGTAATTGTTACTCCAGCAATGCTGAATGAGAAAACAGCTACTGAAACTCGTCGTGGTGTAGCTGAAATTGCTACTCAAAGCGAAACGGATGGTTCAACTGATGATACTACAATTGTAACTCCTAAAAAGTTGCATAATCGTAAAGCTTCAGAAATATTGACTGGTATTTTAGCTCTGGTTAAAACGGGAATAACTACTGTTGCTGGTGTAGATCGTGATACTAAAGGAACTAACGTATACGATAACACTGAGAATACGAAAGCTGTAACTCCAGCTTCTTTGTTTGAAAATAAAGCAACTTACACCTCACAAGGTGGTACTTATTTAGCAACCGAGAATGAAGTAATTAATGGAACGGCGCATGATCCTAAAATTCCTACTGCCGTAACGCCGGTTGAGTTGCATAAGAAAACTGCAACAGAAGGAAGAATTGGTTTTACTGAAATTGCTACTCAGCCAGAAACTGATGCTGGTACTGACGATTTCCGATACATTACACCTAAGAAATTATCTGGTCGTAAAGCAACCCAAGATTTAACTGGATTAGCACGTATCGCTACTCAACCAGAATTCAATGCTGGCGCATTGGACGATGTCATCTCGACTCCGTTCAAAATTAAAACTTATTTCTCTGATCCTGCTAGACACTCTGTTGAACTGTTGTCTGGATTAGTTGAATCAGGTAACTCCTGGGACCATTATAAACTTGATATCAAGAAAGCATCTGAGACACAACGTGGTACTTTGGCGGTTGCTACTAAGATTCTGGTAGATGCTGGTGTAGATGACCAAACTATCATTACTCCTAAAAAGCTTCAAGATAAGAAGACATCAGAAACAACTGAAGGTATTATTCAGATCGCAACTCGTCTTGAAACAACGACAGGAACGGTTGGTAATAAAGCGGTTCCTCCAGTTCATCTGAAGTATGCTATTCAAGAACAATCTGATTGGGAAGCTACGCCTACTCGTCGTGGTCCAGTTAAATTGACTGAATTAGCACTTACTTTCGTCGGTGATAAAGTATTCGGCTCTGGTGTGAAATTTAACGCTACTACTGGTCTTTATGAGAATGATGATGCTAAACTGACTGCAGGAAATTATTTCAAAACCGGATATGCGGTATCTCCATTTGAAATGAATAAAACGCTTCAGAATTTCTTGCCGATTAATGCAATTGCTACAGATTCACATAAGCTTGATGGACTGGATTCACTGCAGTTTATTCGCCGTGATATCGATCAGACTGTTAATGGTTCATTAACTTTAACCAAGCAGTTAAACACTAGTGCACCTCTGGTGTCCTCTAGTACATCGAAGTTCACTAACGTAATGGCTACTATAGACCTGACTGTTGGTGATGACTCAAGTCACTCTGTGATTAATTTGAATGCCAAAGGGAACCATTGGTTGATCGATGCTCAATCTCAATCAACTTACTTGGATTTCACTGCAGATGCTGATGTACTTCGTCTGAAACGTGACGGTGATGTTGAAGTTGGACAAACGCTTAAAGCCGGTAATAGAATCGATGCTATGAAAGGCTTTAGCGTAGAAGGTGGTACAATGGTTATTAATCCTACCCCTTCAAATATTCAATTTGGTTCACAATCAAAAGCTACTAATATTCAGACAACTGATGCTAGTAACTTAACGGTAACTGATTCTACTGGTACTTCTACAGTGATCACTACCAAGAACATGGTAAATCAAATTGGTTTGAACTTCGTCAAGAAAATTGGCGATTCAATGACTGGAAACCTCTTGATTGATGCTACGCTTCGCGTACAGATTCCTGAGGGAGTTGTTACTCCAGATCAAGCTCCGACTGATGCTAACCCGAATGCATGGTCCTCTTCAATTAAAACTTCTGCTGTGTACAATAAGCTTCCGGGCTTTGTTGTTCCAGTGTATGGAACTAATGAAGAAGGTAATCCAGTTGCAATCGATTATACAGAAGTCAAAGGCCCAGGTACATTAACTCAGCATGGTATTGACAAAAATAGCATTTGGCAAATTTGGGCACCTCGCCCAGCAGCAGTCGATGCTACTTATTTTGCTCAAACTTTCTGGATACGTAACTTCAACGCCCTGACTGGAAAATGGGATAAATGGGGCAGAATGTACACCAGCAATAATCCACCTACTTCTAAGGAAATTGGTGCTGTTGCGGCAGGTGGTTCTGCATTTGATAACTTAACAATCCGCGATTGGTTGCAGATCGGTAATGTTCGTATAACTCCGAACCCGGTAACTCAATCTGTAGATTTCACTTGGATTCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
af7dd7527a2b9078cb303aa1ffed86f03b1f541fc788beedce57bedd41da4628
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2689
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50