Protein

Genbank accession
YAO59830.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,93
TF
Evidence Phold
Probability 1,00
Protein sequence
MIYSQLETLNKCLIDWNVNYSVYPYNGYTINEVLCQFFDAINKGIITINEYTNMVGALMDWVRKEGLKDEVNKALDKMIEDGTLDNIINQKLLSDILQLVEDTKSDLENNIGEVEEKVNSDIGKVKEELKENVNEIEKNLNVKFEELGTDVNDKIANVKKALAIQKGVIVFLNEYGEQAKEGTEEEDWSLAFNYVFKNVVKDTVATIIWNGRLKIKSTINLPKHVNISGVGLPWSGLTPTVDFVGEYVITDLNVPSHNSIKNIYMDFAYNKRIKGLKALNPYDYNEYKFLVADGIGDTFLDIGGKDISQSTRIEDCVAYRENRGEGSIVELRNCQEFYIENNKFMYKEQGKHECIWCDGVTNTTFIHNSLAFTDETALKLLAYNYPKRLNGNVIQDNLFEGIGSKGCVNIIGSSDPDLEGSYNTIRDNSYFSSTQMISLGNIANTYVNDPVKINSLGGDRRTYLFNRYNATSKTPYGSVEEWCDGAYKMTKSWFKIIPTQEGEPSYFYMTDEGGKERTITITSDGQFKIV
Physico‐chemical
properties
protein length:530 AA
molecular weight: 60141,03520 Da
isoelectric point:4,81127
aromaticity:0,10566
hydropathy:-0,42057

Domains

Domains [InterPro]
G3DSA:1.20.120.20
42–190
G3DSA:1.20.120.20
SSF58113
92–185
SSF58113 IPR011050
Coil
97–117
Coil Coil
YAO59830.1
1 530
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage PhiCP17-i
[NCBI] 		3454120 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAO59830.1 [NCBI]
Genbank nucleotide accession
PV983592 [NCBI]
CDS location
range 10163 -> 11755
strand +
CDS
ATGATTTATTCTCAATTAGAAACATTGAATAAGTGTTTAATAGATTGGAACGTAAATTATTCTGTATATCCTTACAACGGTTATACAATAAATGAAGTGTTGTGCCAATTTTTCGACGCAATAAACAAAGGTATTATAACTATCAATGAATATACTAACATGGTAGGAGCATTGATGGACTGGGTAAGAAAAGAAGGTTTAAAAGATGAGGTTAACAAAGCGCTAGATAAAATGATTGAAGACGGCACACTTGACAATATAATAAATCAAAAATTGTTAAGCGATATATTACAGTTGGTAGAGGACACAAAATCAGACTTAGAAAACAATATTGGAGAAGTTGAAGAAAAAGTAAATTCAGATATAGGAAAAGTTAAAGAAGAGTTAAAAGAGAATGTCAATGAAATTGAAAAAAACTTAAATGTTAAGTTTGAAGAACTAGGCACAGATGTGAACGATAAAATCGCAAATGTCAAAAAAGCGTTAGCAATTCAGAAAGGTGTTATAGTTTTTCTAAATGAATACGGCGAACAGGCTAAGGAAGGAACAGAGGAGGAAGACTGGTCACTTGCATTTAATTATGTGTTTAAGAATGTTGTAAAAGACACAGTAGCAACTATAATATGGAATGGTAGATTAAAAATAAAGTCTACAATAAACTTACCAAAACACGTAAACATTAGCGGAGTTGGGTTGCCCTGGAGTGGTTTAACGCCTACAGTAGATTTTGTAGGAGAATATGTTATCACCGACTTGAACGTTCCTTCTCATAATAGTATTAAAAATATATACATGGACTTTGCTTATAATAAGAGAATTAAAGGACTTAAAGCATTAAACCCTTACGATTATAATGAGTATAAGTTTTTAGTTGCGGACGGTATAGGAGACACCTTCTTAGACATAGGAGGTAAGGACATATCACAGTCAACTAGGATAGAGGATTGCGTGGCATACAGAGAAAACAGGGGAGAGGGTTCAATAGTTGAACTAAGAAATTGTCAAGAATTTTATATTGAAAACAACAAATTTATGTACAAAGAACAAGGTAAACATGAATGTATATGGTGTGACGGTGTTACAAACACAACATTTATACACAATAGTTTAGCTTTTACAGATGAAACGGCGTTAAAACTGTTAGCCTATAACTACCCTAAGAGATTAAACGGTAATGTTATACAAGACAACCTGTTTGAGGGAATAGGTAGTAAAGGGTGTGTTAACATTATTGGTTCATCTGACCCCGACCTTGAAGGAAGTTATAACACAATTCGTGATAATTCATACTTTAGTAGCACTCAAATGATTTCACTCGGTAATATCGCAAACACATATGTGAACGACCCTGTAAAAATAAATAGTCTAGGTGGAGATAGAAGAACATACCTGTTTAACAGATACAATGCTACTTCTAAGACACCTTATGGTAGTGTTGAGGAATGGTGTGATGGAGCCTATAAAATGACTAAATCATGGTTTAAAATAATTCCAACACAAGAAGGAGAGCCGTCATATTTTTACATGACAGATGAAGGAGGAAAGGAAAGAACTATCACAATAACATCAGACGGGCAATTTAAGATAGTTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.

Literature

Title Authors Date PMID Source
Genomic and Physiochemical characterization of two Lysogenic bacteriophages PhiCP5-17 and PhiCP17-i against Clostridium perfringens Nasim,H., Haider,Z., Mannan,S. and Rehman,S.U. 2018-02-06 — GenBank