Protein

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Genbank accession
YAO55074.1 [GenBank]
Protein name
straight fiber tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MISNNAPAKMVLNSVLTGYTLAYIQHSIYSDYDVIGRSFWLKEGSNVTRRDFTGVDTFSVTINNLKPTTTYEVQGAFYDSIIDSELLNAQIGINLSDKQTFKMKSAPRITGARCESEPVDVGVGAPIVYIDTTGEADYCTIELKNNSNANNPWVKYYVGALMPTIMFGGVPIGFYKVRISGQISLPDGVTIDSSGYYEYPTVFEVRYNFVPPTAPVNIAFKAARIADGKERYDLRVQWDWNRGTGANVREFVLSYIDSAEFARTGWTKAQKINVGAAQSATIISFPWKVEHKFKVSSIAWGPDAQSITDSAVQTFILNESTPLDNSFVNETGIEVNYAYIKGKIKDGSTWKQTFLIDAATGAINIGLLDEEGKAPISFDPIKKIVNVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDTRSGIWMGMDNATAKPKLDIGNATQYIRYDGDTLRISSGVVIGTPNGDIDIATGIQGKQTVFIYILGTSLPAKPTSPAYPPSGWSKTPPNRTSNTQNIYCSTGTLDPVTNQLVSGTSWSDVVQWSGTEGVDGRPGADGRPGDTGQRGPGMYSLAIANLTAWNDSQANSFFTSNFGTGPVKYDVLTEYKSGAPGTAFTRQWNGSAWASPAMVLHGDMIVNGTVTASKIVANNAFLSQIGVNIIYDRAAALSSNPEGSYKMKIDLQNGYIHIR
Physico‐chemical
properties
protein length:694 AA
molecular weight: 75311,67570 Da
isoelectric point:5,64465
aromaticity:0,10375
hydropathy:-0,22118

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
104–196
IPR057551
YAO55074.1
1 694
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-335 | STR 350-673 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAO55074.1
1 694
Domain Start End Length (AA) Confidence
N-terminal 1 409 409 0,8473
Central domain 410 659 251 0,1795
C-terminal 660 694 34 0,9043
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-409
Central
410-659
C-terminal
660-694

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_CECAV_033
[NCBI] 		3456260 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAO55074.1 [NCBI]
Genbank nucleotide accession
PX061015 [NCBI]
CDS location
range 89653 -> 91737
strand -
CDS
ATGATTTCAAATAATGCACCAGCTAAAATGGTCCTAAATAGCGTCTTAACTGGATATACGTTGGCGTATATCCAGCATTCTATCTACTCTGATTATGACGTTATAGGCAGGTCTTTTTGGCTTAAAGAAGGCAGCAACGTTACTCGTAGAGATTTTACTGGAGTTGATACCTTCTCTGTAACTATTAATAACCTAAAACCTACAACAACTTATGAAGTTCAGGGTGCATTTTATGATTCTATAATAGACTCTGAACTACTTAATGCTCAGATAGGTATTAATCTATCTGACAAACAAACTTTTAAAATGAAGTCAGCACCTAGAATTACAGGTGCTAGATGTGAATCAGAACCTGTAGACGTAGGTGTTGGAGCACCAATAGTTTATATAGATACTACAGGAGAAGCTGATTATTGTACTATAGAACTAAAAAATAATTCTAATGCTAATAATCCATGGGTTAAATATTATGTTGGTGCGTTGATGCCAACTATTATGTTTGGTGGTGTGCCAATCGGGTTCTATAAGGTAAGAATTTCTGGACAAATATCCCTACCAGATGGAGTAACTATTGATTCATCTGGATACTATGAGTATCCTACTGTCTTTGAAGTTAGATATAACTTTGTACCCCCTACAGCTCCTGTTAATATTGCGTTTAAAGCTGCGCGTATAGCGGACGGTAAAGAACGCTATGATTTACGTGTGCAATGGGATTGGAATAGAGGCACAGGTGCCAACGTTCGTGAATTCGTTCTATCTTATATAGATTCAGCAGAATTTGCTAGAACTGGATGGACTAAGGCACAAAAAATCAACGTGGGGGCTGCTCAGTCGGCAACAATTATATCATTCCCATGGAAAGTAGAGCATAAATTTAAGGTGTCATCTATTGCCTGGGGACCAGATGCTCAAAGTATTACTGATTCTGCAGTACAGACATTTATACTAAATGAGAGTACACCGTTAGATAATAGTTTTGTTAATGAAACTGGTATAGAGGTAAATTACGCATATATTAAGGGTAAAATCAAAGATGGATCTACCTGGAAACAGACCTTTCTAATAGACGCTGCTACAGGTGCTATTAATATAGGTCTTCTAGACGAAGAAGGGAAAGCGCCAATATCTTTTGACCCAATTAAAAAGATAGTTAACGTTGATGGAAGTGTAATAACTAAAACTATTAACGCTGCTAACTTTGTCATGACTAATTTAACCGGTCAAGATAATCCAGCAATTTATACTCAAGGCAAAACTTGGGGTGATACAAGATCTGGTATCTGGATGGGTATGGATAATGCTACTGCTAAACCAAAACTGGATATTGGTAATGCTACCCAGTACATTCGTTACGACGGTGATACATTAAGAATCTCTAGTGGGGTTGTAATTGGTACACCTAACGGTGATATCGATATAGCAACAGGTATACAAGGTAAGCAAACAGTATTTATCTATATTCTAGGAACCTCACTACCTGCTAAGCCTACAAGCCCTGCATATCCACCTTCAGGTTGGTCAAAAACTCCACCGAATAGAACATCTAATACTCAGAATATTTATTGTTCTACTGGTACTCTAGACCCTGTTACTAATCAATTAGTATCTGGAACCAGTTGGTCAGACGTAGTTCAATGGAGTGGTACTGAAGGTGTTGATGGTAGACCCGGAGCAGATGGTAGACCAGGAGATACAGGACAACGTGGTCCGGGAATGTATTCTCTTGCTATTGCTAATTTAACAGCATGGAATGATTCTCAGGCTAATTCGTTTTTTACATCTAACTTTGGTACTGGTCCTGTTAAATACGATGTATTAACCGAGTATAAAAGTGGGGCACCAGGAACAGCGTTTACTAGGCAGTGGAATGGTTCAGCATGGGCTAGCCCTGCAATGGTTTTACATGGTGATATGATAGTTAATGGTACGGTAACTGCTAGTAAAATTGTTGCTAATAACGCTTTCTTATCACAAATTGGTGTAAATATTATATATGATCGTGCAGCAGCACTATCCTCTAATCCAGAGGGATCTTACAAAATGAAGATAGACCTGCAAAACGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2e5403efcd3e0c7ed561782438b0e9130f666debacb0373964276e4157704bb9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8543
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50