Protein

View in Explore
Genbank accession
YAJ19823.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADVLVTGIKIGDMPLKGTVSGNEKLPTGDVGDLAVTPNQIKDFTIQEGNLVNQEQLDDAIESVEQTASGLAGRVQTLEDRTSHVDNTSDLDKPISNATQAALNAKADKVDVYDKSQVYNKTEVSALLDLKANANQVVSSFNGQTGAVTLDQSDLVDVGPNFTATPSFQDVPKLTNPDGSSIPEFDSQIQPLVNSLAVHRQGLTPTFDQAYAASIGGYPLNARLMLDNGDIVRSTVANNTNNPNNDMTGWLNEGSNVGFVESIADMLAISNPHHGQMVHAIHFDKPTGRLKGGGLFKFNSSKTDINDGGVCLNGWVRQLENNVLNPFMFGAYGDFVPKAQEVIERQSGHDDSVAFQNMYNMNEYTVFSNISKLPPENKAQYTFEWGNAMFYIEDTLPVRSYQFTDCKGGKIFFNPIGNKDLFTTPRQEMVDAYAVNTGWNTQTISFVTFKNGCIVGNVTRASTVHANKCFDAANPYKWVFDNMLIERFTKGIHIYPLDTSEWTGGNRIGNFYENELRNVTIAECITGFHNQGNATHCSNLTIGGGYIVGVDYLNKFDYLLINTGAGFSCTGFNIAPAHRQGGKALIYDYCWGSSYSGGYTEWFDTFFELHPQVRQGGFSFIGSHVFKEGGDLIVKIQDDVFSGFDYAANSRDIKPQYVWNQLFNSTGMTIGGKTDLITNFFKYVPQYDFKYGLYGVEADGGLTFDVKRSEQTWTGFTSKHGLRVLNFTGTTKSIRMPIENKNILANVCVLYRNISGFSHAEIKLNVLEFDGTNAKITIAEDVIDYGNGWKLAVVRNINEIVSDGELRIDIPANAQVEFEHIGAYSADGYPFMPTYTSYEPSINSGYDRLFDANTSGGFLLEGDTTRAFLSVVNGAVHARSKKPRVCAVSGLIYPDIIQNTDVSISTEPDTLLLALSASQPISNVGIGAIIRLQQASEIGYYRVVGRNFGSGLFSKNVRVSKELSTGRSITEGAALIYASDYIRQSILVDISSI
Physico‐chemical
properties
protein length:993 AA
molecular weight: 108933,46680 Da
isoelectric point:5,03630
aromaticity:0,10574
hydropathy:-0,24068

Domains

Domains [InterPro]
DC_0704
ATT
1–397
DC_0704
Coil
Unmapped
61–81
Coil
YAJ19823.1
1 993
Architecture
ATT
ATT 1-397 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAJ19823.1
1 993
Domain Start End Length (AA) Confidence
N-terminal 1 350 350 0,9733
Central domain 351 680 331 0,9933
C-terminal 681 993 312 0,5986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-350
Central
351-680
C-terminal
681-993

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AbYfo_2
[NCBI] 		3458431 Viruses > unclassified bacterial viruses >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAJ19823.1 [NCBI]
Genbank nucleotide accession
PX121509.1 [NCBI]
CDS location
range 57700 -> 60681
strand +
CDS
ATGGCTGATGTATTAGTCACAGGTATTAAAATTGGGGATATGCCCCTTAAGGGAACTGTTTCAGGGAATGAGAAGTTGCCTACTGGAGATGTAGGAGATTTAGCTGTTACTCCTAATCAAATTAAAGACTTCACGATTCAAGAAGGTAACCTTGTAAATCAAGAACAACTCGATGATGCAATAGAGTCAGTAGAACAAACAGCTTCAGGGCTTGCTGGAAGAGTGCAGACACTAGAAGATAGAACTTCTCATGTAGATAATACATCTGATCTTGATAAGCCTATCAGCAACGCTACACAAGCTGCTTTGAATGCTAAGGCAGATAAGGTTGATGTCTACGATAAGAGCCAAGTTTACAATAAGACTGAGGTCAGTGCTCTATTAGATCTTAAAGCTAATGCAAACCAAGTAGTTTCTTCTTTTAATGGTCAAACTGGTGCAGTTACACTAGATCAATCCGATCTTGTGGATGTTGGTCCTAATTTTACTGCAACACCAAGTTTCCAAGACGTACCTAAATTAACAAATCCAGATGGTAGCTCTATACCAGAATTTGACTCACAGATTCAACCATTAGTAAATAGTTTAGCAGTCCACAGACAGGGATTAACCCCGACATTTGATCAAGCTTATGCTGCATCTATAGGTGGCTATCCTTTAAATGCACGCTTAATGCTTGATAATGGTGATATTGTTCGCTCTACCGTTGCGAATAATACAAATAATCCGAATAACGATATGACGGGGTGGCTCAACGAAGGGTCTAATGTTGGTTTTGTAGAATCTATAGCTGATATGCTTGCAATCAGTAACCCTCATCATGGACAAATGGTTCATGCAATACACTTTGATAAGCCTACTGGTCGCTTAAAGGGTGGCGGACTTTTCAAGTTTAATTCTAGCAAGACAGATATAAACGATGGTGGTGTATGCCTTAACGGTTGGGTTCGACAATTAGAAAACAATGTGCTAAATCCTTTTATGTTTGGTGCGTATGGAGATTTTGTGCCGAAAGCACAAGAGGTCATTGAGCGTCAATCTGGACATGACGACAGTGTTGCTTTCCAAAACATGTACAACATGAATGAGTACACTGTTTTTAGTAACATTAGTAAATTACCTCCTGAAAATAAAGCTCAATATACTTTTGAATGGGGTAATGCAATGTTCTATATCGAAGATACATTGCCAGTTAGATCATACCAATTTACAGATTGTAAGGGCGGTAAGATTTTCTTTAATCCAATTGGAAATAAGGATTTATTTACTACTCCGCGTCAAGAGATGGTTGATGCATATGCGGTAAATACGGGATGGAACACGCAGACAATTTCATTTGTGACATTCAAGAATGGGTGTATTGTCGGGAACGTAACACGAGCTTCAACTGTACACGCTAATAAGTGTTTTGATGCTGCAAATCCTTATAAGTGGGTTTTTGATAACATGCTTATTGAAAGATTTACAAAGGGTATACATATTTATCCTCTCGATACATCGGAGTGGACGGGCGGTAATCGTATTGGTAATTTTTACGAAAATGAGCTTCGCAATGTGACTATTGCCGAGTGTATCACAGGCTTTCATAATCAAGGAAATGCCACTCATTGCTCTAACTTAACAATTGGTGGCGGATACATTGTTGGCGTGGACTACCTTAATAAGTTCGATTATTTGCTTATAAATACAGGTGCGGGATTCTCTTGCACAGGATTCAACATCGCGCCTGCGCATAGACAGGGCGGTAAAGCATTAATCTATGATTATTGTTGGGGTTCTAGTTATAGTGGCGGGTACACAGAGTGGTTTGACACTTTCTTCGAATTACACCCTCAAGTAAGGCAGGGCGGATTTTCTTTTATTGGCTCTCATGTATTTAAAGAGGGCGGTGACTTAATAGTTAAGATTCAAGATGATGTTTTCTCCGGGTTTGACTACGCAGCAAACTCAAGAGATATTAAGCCACAGTATGTTTGGAATCAGTTGTTTAATAGCACGGGTATGACTATTGGTGGAAAAACAGATTTAATCACTAACTTCTTTAAATATGTTCCGCAGTATGATTTTAAATATGGATTGTATGGCGTTGAAGCAGACGGTGGTTTGACATTCGATGTTAAACGATCAGAACAAACGTGGACAGGCTTTACAAGTAAGCATGGTTTACGTGTTCTTAACTTCACAGGCACTACTAAGTCAATAAGGATGCCGATTGAGAATAAAAACATTTTAGCGAATGTTTGTGTTTTATATCGCAACATATCTGGGTTTTCTCACGCAGAGATCAAACTTAACGTTCTTGAGTTTGATGGTACTAACGCAAAAATTACAATTGCGGAAGATGTTATTGATTACGGTAACGGTTGGAAACTTGCAGTCGTTAGAAACATTAATGAGATTGTATCCGATGGTGAGTTACGGATTGATATTCCTGCGAATGCTCAAGTTGAATTTGAACACATCGGGGCATATAGTGCTGATGGTTATCCCTTTATGCCTACTTACACAAGTTACGAACCATCAATAAATAGCGGTTATGATCGACTTTTTGATGCGAATACAAGTGGCGGTTTCTTGCTTGAAGGAGATACTACACGAGCATTTTTAAGCGTGGTGAATGGCGCAGTTCATGCTAGATCGAAGAAGCCCCGTGTATGTGCAGTATCGGGCTTGATTTATCCTGATATTATTCAAAATACAGATGTTTCTATTAGTACCGAACCTGATACTCTACTGCTTGCTTTGTCTGCTAGTCAGCCGATTTCTAATGTTGGTATAGGCGCTATCATAAGATTACAGCAGGCGAGCGAAATTGGTTATTATCGTGTTGTTGGTAGGAACTTCGGTAGTGGGTTGTTTAGCAAAAATGTAAGAGTTAGTAAAGAATTATCTACTGGCAGAAGCATTACGGAAGGTGCTGCTCTCATCTACGCATCTGACTACATTAGACAATCCATCCTTGTAGACATATCGAGTATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
07274aedf676f0cca0b34eb4c83f359b78a6c25541219734f46f0a2e1efcfd01
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7251
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50