Protein

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UniProt accession
Q0QZC0 [UniProt]
Protein name
Structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANRIQLRRGGAQEWANANPTLAQGELGIELDTGRIKIGDGVTAWNSLRYERPIESTSNTANTLVQRDADGNFAAGTITATLIGNASTAARLSSTRQIQLSTDVTASGVFDGSANLNLNAELSLVQTLPHYDGTTAPSATYTKLTVDAKGRIINAANPTTIQDYGLDTSIEGTGAQPYDADLASLAGLTTTGIIARNAPNNIVTRTITGTPSRIAINDGGGINGNPTIDLIVTAVQAGDYNTESLTSVSAVGGNSEPFGTETVNATKFTVDAYGRLTNAVNVPIATATEGSKYPNYDAGTAYVRYDIIQNASKVYQALTSINAGAGAPTHSSGDTGSWRYLAAEATEQKGLASFAQEDFDVDSNGHVTIAALGVDNTQLQNNRIIYTDGNTIQEFELDNELTTSTAHTGFDYLNYIKINDTSGNLLFGANNTGDSGAGEIDVNVRSYFSDPDITLDGAVAQTLDKTGDGNLTFQLTQNSADARNLSILSTNAGSGTSTVTITAEDVVDIDASDANGKVHVENARFQANYIATTDATMNLDPGDDRAVTGTVRVWGDLQVDGTTTTVNSTTLQVDDPIITLGGDTAPTTDDNLDRGIEFRYYDTEARLGFYGWDTGYTDLGGHEGGYRFLHAATNTAEVFTGTDSGIIAGNVKLTTNTNSTSNTTGDLVVAGGAGIGQDVNIGGLLDVDGTLRVTSTSRFDDSIVLQGASKTLQLNNGSGTTRIELQSTTGNASFYGVVDITNDLNINTNKFNVASATGNTLIAGTLGITGDTTVTGATDLNSTLNVSGFTYLENTAEPQIALNSGNGEWEIQSSDYGAFRFDGGGYVEGETLFNSDIYVNGQVVQQENVSEVYNRQNYLQVRYKLRTGTSAAYNPSFATDNNSNLRVFGGAGIYQDLHIGDDLYIGKLNSGDTTEFSVLGESGNTTIGRSGAGTSSVGTLTVYGDTLLDRNLTVNGSAITLGNASSDVLTVNADATFNDDVTINGDNLMFTIEAQNGTDAFTVDSDNGNTVIAGTLNVDDATTITNTLNVTNGVDFDQTLNVDGAVDFNSTLVVDGQTTIYDSLILQSDNEVFNINTSSGATRFSVDFDNGNTNIVGTLTVGNATQLNNTLGVTGISSFTNAADQTLTGLYGADGAVRLTGGMGVAKNLAVGGNMRVYGDFEITGSTTQSGNTGFSGRVSITNTSDITSYTDNTVSLSTEGGFRAEKNAYIGGDFYIWDAANSRAAFSVDNSTGNAELHNNLIIGGNLTVNGTTTTVNSTVTTLDDPIITLGGDTAPVSNDGKDRGVEFRYYDGSAKTGFFGFDRGSQQYAFLTDTSNSSEVISGTDAALRAGSLNLTGTGTTLDVDANANIDGTLTVDGQIISQVSSGPALVIPTTNKINNLNADLLDSMTTASAATPTTVVNRDSNGDFAANQITVNNGIGALAGIQGNATTADALRTARTITIDGVVDGSVSFDGSANVTISTVYNDADITALAAMAGTGFVSRTAANTYAQRTLQVTASSGITLTNADGVSGNPTINVASASTNAANNLVIRDASGNFAANVITADLVGDVTGQVSSIANHSTTNLTEGTNLYYTTARANADFDTKLAAATTTDLTEGTNLYYTNARADARIVAAGLSAGTLTGNVTGNVTGNADTATAVSVSQSGSVGDFFVGIVANAAASGTSALRADSGMKFNTGTNILTVLGGVAANVTGNVTGNLTGNVTGDVTGNLTGNVTGDVTGNVDGNVSGEVTLEGTAPTTATDPGTAGDIRYDADYVYVCVATDTWKRSALATW
Physico‐chemical
properties
protein length:1779 AA
molecular weight: 183743,90310 Da
isoelectric point:4,10408
aromaticity:0,06464
hydropathy:-0,18072

Domains

Domains [InterPro]
SSF69349
STR
4–242
SSF69349 DC_1607 DC_1617 DC_1607 DC_0520
IPR041352
ATT
5–43
IPR041352
Q0QZC0
1 1779
Architecture
ATT
STR
STR
STR
STR
RBD
ATT 4-43 | STR 44-242 | STR 329-948 | STR 963-1061 | STR 1106-1556 | RBD 1644-1779
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage syn9
[NCBI] 		382359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 8012
[NCBI] 		166313 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
57d5fc6b6660c098373cd2951a6237da366f2c5ba8c4e514fe5aca0c7763ef91
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5629
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50