Protein

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Genbank accession
XAI65210.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTYDTGDLPLGSKDPRVLYENAEHLDLAMNSLNQDRWMDRGPQRPPVARWTWWGIEQYVMQWLAAQGFEPTPLDYVDGSPLIVDRPTQLIQRDGNLYSVQLPADFPVSLSGNWATDEPLLVNQVDRALRAELVNESDPALGAAIVGRSAVVVESLADLVGSPRKTTHTYHVRGHRPGITTGGGVFVWDPLMPRSMHNGGTVISPTVPAYTAQPGLADYLAGVGETEPSASGAFVRRIENNTVRLEYFGWVEGELGTAPLAMLLRETRSNEGDGANIGAVAMLPPGTVRTGPVTLGSNQIIGGTSRTIILQEPGTVVGDVQPFLTAAGQVNLMIMGNGMQVNGQKNEATSGEGRYGIFLYGAKKVLIQDVTVNSFSGDGLAVTGNVSAPCEDVRLERVTCNFNGRNAFSVINAKRATLVNCRGTNTNTNGIGASANGPWAGFDIEPNEGSGYFLEDINLIGCSSEGNAGSGLQFTIPNSNSPVTVRVYGFQSRRDGSGTQYGGKCGGIGFIYGGGITPPVNMNGHISIVNPYIDEPFGSGIRFRNWSAKNAPVTIQRATVRNVNYGASTGNINRCGLWIDSSDASDVLETKGNFEIDGLMCYDDNAQLVRPVWALGTTSAPVVARIREVYVNRHGYPAVNPIRAKVLGGVSWNEPPVISLATAPTTLGYEYAGQVIDITAAGGFTLPEASLTTGMRYCIRNSSGGSVTVTTAGGTISGSTYATYTNTGTTLTLTTGQYAEIWSNGTAWILK
Physico‐chemical
properties
protein length:750 AA
molecular weight: 79852,59050 Da
isoelectric point:5,21051
aromaticity:0,08000
hydropathy:-0,16547

Domains

Domains [InterPro]
DC_1559
ATT
1–180
DC_1559 IPR012334 IPR006626
IPR011050
STR
277–474
IPR011050 DC_0954
IPR006626
Unmapped
328–360
IPR006626 IPR006626 IPR006626 IPR006626
XAI65210.1
1 750
Architecture
ATT
STR
ATT
ATT 1-180 | STR 269-490 | ATT 491-750
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAI65210.1
1 750
Domain Start End Length (AA) Confidence
N-terminal 1 255 255 0,9948
Central domain 256 656 402 0,9940
C-terminal 657 750 93 0,9755
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-255
Central
256-656
C-terminal
657-750

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage VB_PaD_phPA-G
[NCBI] 		3141252 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAI65210.1 [NCBI]
Genbank nucleotide accession
PP083311.1 [NCBI]
CDS location
range 36717 -> 38969
strand -
CDS
ATGACTTACGACACCGGCGACCTTCCGCTCGGCTCGAAGGACCCTCGCGTTCTGTACGAAAACGCTGAGCATCTCGATTTGGCAATGAACTCGCTGAATCAAGATCGCTGGATGGACCGTGGGCCTCAGCGTCCTCCGGTTGCGCGATGGACCTGGTGGGGAATCGAGCAGTATGTCATGCAGTGGCTGGCCGCTCAGGGCTTTGAGCCAACCCCTCTCGACTATGTCGACGGCTCTCCGCTGATTGTTGATCGCCCGACTCAACTGATTCAGCGTGACGGGAACCTGTATAGCGTTCAACTGCCAGCAGATTTCCCGGTCAGCCTCAGCGGGAACTGGGCTACCGACGAGCCGCTACTTGTGAACCAGGTTGATCGCGCGCTACGCGCTGAGCTGGTCAATGAGAGCGATCCAGCGCTTGGCGCGGCAATCGTAGGCAGGTCCGCAGTTGTAGTTGAATCACTTGCCGATCTCGTCGGATCTCCGCGGAAAACGACTCATACGTACCATGTTCGTGGGCATCGCCCAGGCATTACAACCGGTGGCGGCGTATTCGTCTGGGACCCGTTGATGCCTCGATCAATGCACAACGGCGGGACGGTAATCAGTCCGACGGTCCCTGCATACACCGCTCAGCCTGGCTTGGCAGACTATCTCGCCGGCGTCGGCGAGACGGAGCCGTCGGCGAGCGGTGCATTCGTTCGCCGGATCGAGAACAACACTGTGCGGCTGGAGTACTTCGGCTGGGTCGAAGGAGAACTTGGAACGGCACCACTCGCGATGCTGCTTCGTGAAACTCGATCTAACGAGGGCGATGGCGCCAACATTGGGGCAGTCGCAATGCTACCACCTGGTACGGTTCGCACGGGTCCAGTTACGCTCGGCTCAAACCAGATTATCGGTGGAACAAGCAGAACAATTATTCTCCAGGAGCCTGGAACTGTTGTTGGTGACGTCCAGCCTTTCCTAACTGCCGCTGGTCAAGTAAACCTCATGATCATGGGTAACGGCATGCAGGTTAATGGACAAAAAAACGAGGCAACCAGCGGAGAGGGTAGGTATGGAATATTCCTCTATGGTGCAAAAAAGGTCTTAATCCAAGATGTAACTGTAAACTCATTTTCGGGAGATGGATTGGCAGTGACAGGTAATGTATCTGCCCCGTGTGAGGATGTGCGACTTGAAAGAGTTACCTGTAACTTCAATGGAAGGAACGCCTTTTCAGTTATCAACGCCAAACGAGCAACCCTTGTTAACTGTCGAGGCACTAACACAAACACCAACGGTATTGGTGCATCCGCTAATGGTCCGTGGGCTGGATTTGACATAGAGCCGAATGAAGGTTCTGGATACTTCCTTGAGGATATCAACCTCATTGGTTGCTCTAGCGAAGGGAACGCTGGCAGCGGATTGCAATTCACTATTCCAAATAGTAACTCTCCTGTTACTGTCAGGGTTTATGGGTTTCAGTCGCGCCGGGACGGTTCTGGTACTCAATATGGTGGAAAGTGCGGGGGGATTGGTTTTATTTACGGTGGAGGGATAACCCCGCCTGTAAATATGAATGGTCATATATCGATTGTAAATCCGTACATTGACGAGCCATTTGGTTCGGGAATTAGGTTCAGGAACTGGAGCGCAAAGAATGCGCCTGTAACTATTCAGCGCGCTACGGTTCGTAATGTCAATTACGGGGCTTCAACTGGCAACATCAACAGGTGTGGGTTGTGGATTGACTCGTCTGATGCATCTGATGTTTTGGAAACCAAAGGGAACTTCGAGATAGATGGACTGATGTGTTACGACGACAATGCGCAATTGGTCAGGCCCGTATGGGCTCTTGGGACTACCAGCGCTCCGGTTGTCGCTCGGATACGGGAGGTCTATGTAAATCGCCATGGTTATCCAGCAGTAAATCCAATCAGGGCTAAAGTTCTCGGCGGTGTTAGTTGGAATGAGCCTCCTGTCATTTCGCTGGCAACGGCCCCAACAACTCTTGGCTACGAATATGCCGGGCAGGTGATCGACATTACCGCTGCCGGAGGTTTCACCTTGCCTGAAGCATCTCTCACGACTGGAATGAGGTACTGCATAAGAAATAGTTCAGGCGGAAGCGTTACGGTTACAACAGCAGGCGGCACGATCTCTGGCAGTACCTACGCGACATACACCAACACCGGCACAACGCTAACCCTGACAACGGGGCAGTACGCTGAGATTTGGAGTAATGGTACGGCCTGGATACTGAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5af924a58d7707b8b70eff4ad5199d379b1b84bb33c4366f3e0b16d088a4278e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7981
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Potential of Phage Treatment to Inactivate Planktonic and Biofilm-Forming Pseudomonas aeruginosa Martinho,I., Braz,M., Duarte,J., Bras,A., Oliveira,V., Gomes,N.C.M., Pereira,C. and Almeida,A. 2024 — GenBank