Protein

View in Explore
Genbank accession
QIG75485.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,77
Protein sequence
MKLVFWFFVALLTLTETALADPVTAAIGAFASTAIGGFIVKAVIGLALSIGTSLLKGMLTKKKPGQKDPGTSIQLQVGGDNSLFFPLGRAATGGVRVYCGTWTGDGLSFGKTPNEYAVDVIALSAIPLSSTNIILWMNDQKVTVLTSESKTEMGWPINEYRYKGKDYAWVDFFDGTQTTSSSYLLSRFGSHPDYPWTSDMIGRGVAYAIFTARYQSNGLWSGGFPSLTFELPSIRLYDIRKDSTAGGSGTHRWNNPATWQASNNNMVRAYNVMRGIYYGNEWVYGGQDWPAFRLPAASWMAGMNACDLVVGGVNQFHGGGMVECDVEPAKSVEELLRGASGLIAEIGGVYKIRIGAPGAAVFSFTDDNILVTREQGYSPFPGLEDTYNIVRLSYTEPAEKWASKEAPERRDAAMIAADDNRELPMSVELPWTLNNPTAQRIGLAALQNGRRFRRHQHYLPPEAWLLEPLDVVSWSSTHNGYINKTFDIEQISGESTLMQGVTIRENDPTDYDWNPETDELPYTTVPLIPSFPAPQQMTGWQVQPAILKDNDGEDRRPSIQVFFDAELTDVARVRVQVRLDGDTNAMFDGEVPYDPTLLAPSVILQGQFLPNTDYQARGIFVPYTDRQTEWSDWLDVTTPNVLFTDKDVYLPGVLDGVNEIISDATKWVRDGVRQTILEQQRIARLTMDQDFGDYTDRQKLRTELVSVQQGVTASYSNAIVVATGPNSALSLRIEELTTYVNDVVATAIQTLSAEIDAQGTALSQAITALSAANTSGDVATANFRMTATAGPDGVSARIAMEARAGGIGAFKSAGLFIDVPEDDADPSRVVILADQFVVADPDDSVTQQFPLIFQDGELTLNVANIGTVNAGLITNPGGKMNIDIDNGTIEIYD
Physico‐chemical
properties
protein length:893 AA
molecular weight: 97535,34960 Da
isoelectric point:4,55555
aromaticity:0,09630
hydropathy:-0,16495

Domains

Domains [InterPro]
DC_0187
STR
6–882
DC_0187
IPR032876
ATT
329–479
IPR032876
QIG75485.1
1 893
Architecture
STR
ATT
STR
STR 6-328 | ATT 329-479 | STR 480-882 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y2_4
[NCBI] 		2509773 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG75485.1 [NCBI]
Genbank nucleotide accession
MN988546.1 [NCBI]
CDS location
range 24039 -> 26720
strand -
CDS
ATGAAACTCGTTTTTTGGTTCTTCGTCGCGCTTCTGACGTTGACAGAGACGGCGCTAGCCGACCCCGTCACGGCTGCGATCGGCGCGTTTGCTTCGACTGCGATCGGCGGGTTCATCGTCAAAGCGGTGATCGGCCTTGCGCTGTCGATCGGCACAAGCCTTTTGAAAGGCATGCTGACGAAGAAGAAACCGGGTCAGAAAGACCCCGGAACAAGTATTCAGCTTCAGGTCGGCGGCGACAATTCGCTATTCTTCCCGCTAGGCAGGGCCGCGACCGGCGGCGTCCGTGTCTATTGCGGCACGTGGACGGGAGACGGTCTGTCATTCGGCAAAACCCCGAATGAATACGCCGTTGACGTTATCGCCCTGTCTGCCATACCTCTTTCGTCGACGAACATTATTCTATGGATGAACGACCAGAAAGTGACGGTTCTGACCAGCGAGTCAAAAACCGAAATGGGATGGCCGATCAACGAATACCGCTATAAGGGCAAAGATTACGCGTGGGTCGACTTCTTCGACGGCACGCAAACGACGTCTAGTTCGTACCTGCTTTCCCGGTTCGGTTCGCATCCGGATTACCCGTGGACGTCGGACATGATCGGTCGTGGCGTTGCATATGCGATCTTCACGGCTCGGTATCAAAGCAACGGCCTGTGGTCGGGCGGTTTCCCTAGCCTGACATTCGAACTTCCGTCGATCCGCCTGTACGATATCCGCAAGGATTCGACCGCCGGCGGCTCCGGAACACACCGCTGGAACAATCCGGCGACATGGCAGGCGTCGAACAATAACATGGTGCGCGCCTATAACGTGATGCGCGGTATCTATTACGGCAATGAATGGGTTTACGGCGGTCAGGATTGGCCGGCCTTCCGCCTGCCGGCCGCGTCATGGATGGCCGGCATGAACGCCTGTGATTTGGTCGTCGGTGGCGTCAACCAGTTCCACGGCGGCGGCATGGTTGAATGTGACGTCGAACCCGCGAAATCGGTTGAAGAACTCTTGCGCGGCGCATCCGGCCTGATCGCCGAAATCGGCGGGGTTTACAAAATCCGCATCGGCGCGCCCGGCGCGGCTGTCTTCTCGTTCACCGATGATAATATCCTTGTTACCCGTGAACAGGGTTATTCACCGTTCCCCGGCCTTGAAGACACGTACAACATCGTGCGCTTGTCCTATACGGAGCCGGCGGAAAAATGGGCTAGCAAGGAAGCGCCGGAACGCCGTGACGCTGCGATGATCGCGGCCGACGACAATCGTGAATTGCCGATGTCGGTCGAACTGCCGTGGACGCTGAACAATCCGACCGCGCAACGTATCGGTCTTGCCGCACTTCAGAACGGTCGGCGCTTCCGCCGCCATCAGCATTACTTGCCGCCGGAAGCTTGGTTGCTTGAACCGCTTGACGTCGTGTCGTGGTCATCGACACACAACGGCTATATCAACAAGACGTTTGATATTGAACAGATCAGCGGCGAATCGACCTTGATGCAGGGCGTTACGATCCGCGAAAACGACCCGACCGACTACGACTGGAACCCGGAGACGGACGAACTTCCGTACACAACGGTTCCGCTTATCCCTAGCTTCCCGGCTCCGCAACAGATGACCGGTTGGCAGGTTCAGCCGGCGATTCTGAAGGACAACGACGGCGAAGACCGCCGGCCGTCGATCCAAGTATTCTTCGACGCCGAGTTGACCGACGTCGCGCGTGTGCGTGTTCAGGTCCGACTTGACGGCGACACAAACGCGATGTTCGACGGTGAAGTTCCGTACGACCCTACGCTTCTTGCACCGTCCGTGATCCTTCAAGGTCAATTCCTGCCGAACACCGATTATCAGGCGCGCGGGATATTCGTTCCGTACACCGATCGACAAACCGAGTGGTCGGATTGGCTGGACGTGACGACCCCGAACGTCCTGTTCACCGACAAGGACGTTTACTTGCCGGGCGTGCTGGACGGCGTGAACGAAATCATCAGCGACGCGACGAAGTGGGTTCGGGACGGAGTGCGTCAAACGATCCTTGAACAGCAACGCATTGCGCGCCTGACAATGGATCAGGATTTCGGCGACTATACCGATCGCCAGAAGCTCCGCACGGAGCTTGTCAGCGTTCAGCAAGGCGTGACCGCAAGCTATAGTAACGCGATTGTTGTCGCGACCGGGCCGAACTCCGCGCTTTCGCTTCGTATCGAAGAACTGACGACTTACGTCAACGACGTCGTCGCGACCGCGATTCAAACCCTGTCGGCGGAAATCGACGCACAGGGCACCGCATTATCACAGGCTATCACCGCCCTGTCGGCCGCGAACACGTCCGGAGACGTGGCGACTGCGAATTTCCGCATGACCGCGACCGCCGGTCCGGATGGCGTTTCAGCTAGGATCGCCATGGAAGCGCGCGCCGGCGGTATCGGTGCGTTCAAGTCCGCCGGGCTGTTCATCGACGTACCGGAAGACGACGCCGACCCGTCGCGCGTGGTCATCCTCGCCGATCAGTTCGTGGTTGCCGATCCCGACGATTCGGTGACGCAACAATTCCCGTTGATTTTTCAGGATGGCGAACTTACTCTGAATGTGGCAAACATCGGTACGGTGAACGCGGGACTGATCACCAACCCCGGCGGCAAGATGAATATCGATATCGATAACGGAACAATCGAGATTTACGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c42ac46f9de5e826619369fbee82b9fa55f40f0a2d0918f91f0812c90801a689
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3277
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank