Protein

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Genbank accession
QZI87479.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MTQKGTQIFDHVLDNAGTVTVNVESTAFDGLTGGNDDLQTCLELIQEHAVMEIPDFPVASTSQQGITQLSDESAVADETNDSSAVTPSALNYWFENHATATEVQYGFVKLISNNTIDTVEPSASVEEAQKHAFTLRTLNYALDNRFYATETDAGAVRLATEAQATTTGTLSTTVAMTPQRVKQMLDVWANTTASDASESTKGLIRLANGTEVNSTSASENDLAISPYRFNDRTASTSRKAGFFLATQAIADARTSNEHAVTVGTLSLFDATSTRVGVAKVANNLTTNDATQALSAAMGFKLNNEKIGAPGGTVNGTLNINNVQSVAGVQLMQNGLITSRAMLNMYPVGAIYMSVSSTSPATLFGGGWSRIANGRVLVSEGSYDGKTFSVRSQGGEYAVTLTESTMPTHKHAGWGEHYDGNGIGFGVAKQYGRNNPGSKKTDSDNYLYYSEPKGGSEAHPNIQPYYTVYMWERTS
Physico‐chemical
properties
protein length:474 AA
molecular weight: 50610,11840 Da
isoelectric point:4,94081
aromaticity:0,07806
hydropathy:-0,33924

Domains

Domains [InterPro]
DC_0176
STR
1–450
DC_0176
IPR054500
STR
280–302
IPR054500 SSF88874
IPR053827
ATT
344–473
IPR053827
IPR044916
STR
364–465
IPR044916
QZI87479.1
1 474
Architecture
STR
ATT
STR 1-343 | ATT 344-473 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 6E35.1a
[NCBI] 		2859340 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI87479.1 [NCBI]
Genbank nucleotide accession
MW824377.1 [NCBI]
CDS location
range 133996 -> 135420
strand -
CDS
ATGACACAAAAAGGCACTCAGATTTTCGACCACGTTTTAGACAATGCGGGTACCGTGACGGTCAACGTTGAAAGTACAGCATTCGATGGATTGACGGGTGGAAATGATGATTTACAAACTTGTCTTGAGTTGATCCAAGAACATGCAGTGATGGAGATACCGGACTTCCCAGTCGCGAGTACATCACAGCAAGGGATTACTCAACTGAGTGATGAAAGTGCAGTTGCTGACGAGACGAATGATTCGTCGGCAGTAACACCATCCGCACTTAATTACTGGTTTGAAAATCACGCAACGGCAACCGAAGTTCAGTATGGATTCGTGAAGCTGATTAGCAACAATACGATTGACACGGTCGAACCATCAGCGTCTGTAGAAGAAGCTCAGAAACACGCGTTTACGCTTCGCACGTTGAACTATGCACTTGACAATCGCTTTTACGCGACTGAAACAGATGCAGGTGCAGTTCGTCTAGCTACAGAAGCGCAAGCAACTACAACTGGTACGCTTTCAACTACAGTGGCAATGACACCGCAACGCGTTAAGCAAATGCTGGACGTTTGGGCTAATACTACAGCATCAGATGCGAGTGAGTCAACAAAAGGTTTGATTCGTCTGGCGAATGGAACTGAAGTGAATAGCACATCAGCTTCAGAGAATGACTTAGCGATTTCACCGTATCGTTTCAACGATAGAACAGCAAGCACTTCGAGAAAGGCGGGTTTCTTTTTAGCAACTCAAGCAATCGCAGATGCGCGTACGTCAAACGAACACGCTGTTACAGTCGGGACACTTTCGTTATTTGATGCTACATCAACTCGCGTCGGTGTTGCTAAAGTTGCAAACAACTTGACGACAAATGATGCTACTCAAGCACTAAGCGCAGCGATGGGCTTTAAGCTGAACAACGAGAAGATCGGTGCACCGGGTGGTACAGTCAACGGGACACTGAACATTAACAACGTTCAGTCTGTGGCGGGCGTTCAGTTGATGCAAAATGGCTTGATTACATCGCGTGCGATGTTAAACATGTATCCAGTAGGGGCGATTTACATGAGCGTATCTAGCACTTCTCCCGCTACGCTATTTGGCGGCGGCTGGTCGAGAATTGCTAACGGTCGAGTTCTCGTTTCAGAGGGTTCATATGACGGTAAAACGTTCAGTGTCCGATCACAAGGCGGTGAGTATGCAGTTACGCTAACTGAAAGCACTATGCCAACGCATAAGCACGCAGGTTGGGGCGAACACTATGATGGCAATGGTATCGGATTCGGTGTAGCTAAACAATATGGGCGTAATAACCCAGGGTCGAAAAAGACCGACAGTGATAACTACTTGTATTACTCAGAGCCAAAAGGTGGTAGTGAAGCTCACCCGAACATTCAGCCGTATTACACGGTTTATATGTGGGAACGAACTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0fd7ff57b4b0138720d2a5b0823e65a8f7b2c6993e35be31192fb55ee2884dd6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7052
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50